Projects in Awesome Lists tagged with tripal
A curated list of projects in awesome lists tagged with tripal .
https://github.com/tripal/tripal
The Tripal package is a suite of Drupal modules for creating biological (genomic, genetic, breeding) websites. Visit the Tripal homepage at http://tripal.info for documentation, support, and other information. The Drupal project page is at http://drupal.org/project/tripal.
biological-data chado cms-extension drupal hacktoberfest tripal tripal-core
Last synced: 16 May 2025
https://github.com/tripal/tripal_jbrowse
Drupal/Tripal: Drupal integration for GMOD JBrowse instances.
genome hacktoberfest integration jbrowse tripal visualization
Last synced: 05 Apr 2025
https://github.com/tripal/tripal_elasticsearch
chado elasticsearch integration search tripal
Last synced: 05 Apr 2025
https://github.com/tripal/tripal_blast
Provides an user interface to BLAST on Tripal sites.
hacktoberfest integration ncbi-blast tripal
Last synced: 05 Apr 2025
https://github.com/tripal/tripal_analysis_expression
Extension module for the Tripal toolset to show differential expression data. This module was made for Drupal 7, Tripal 3, and Chado 1.3.
analysis chado gene-expression loader tripal
Last synced: 05 Apr 2025
https://github.com/tripal/tripal_remote_job
A Tripal module, Tripal Remote Job can be used to launch jobs on external/remote servers to avoid overloading the webserver.
Last synced: 09 Apr 2025
https://github.com/tripal/tripald3
provides an API for developing consistent biological diagrams with a common configuration, as well as, providing some common diagrams such as pie, bar, column and pedigree diagrams.
api d3js tripal tripal3-compatible visualization
Last synced: 05 Apr 2025
https://github.com/tripal/tripaltestsuite
Handle drupal bootstrapping, load environment variables, and easily wrap your tests in DB transactions.
database-seeder drupal tripal tripal-developer-tools tripal3 unittest
Last synced: 05 Apr 2025
https://github.com/tripal/tripal_analysis_kegg
This module extends the Tripal Analysis Module and provides a method for loading of KEGG ortholog assignments derived from the KEGG Automated Annotation Server (KAAS). The module reads the compressed .heir file or alternatively an expanded heir directory. KEGG assignments appear on each feature page, and a full KEGG report is available for browsing results once uploaded.
analysis kegg-ortholog loader tripal
Last synced: 05 Apr 2025
https://github.com/abretaud/tripal_rest_api
A drupal module exposing a REST API to interact with Tripal 2.x.
Last synced: 07 Apr 2025
https://github.com/tripal/tripal_analysis_blast
This module extends the Tripal Analysis Module and provides a method for loading XML results from the NCBI blast program. Blast results appear on each feature page.
hacktoberfest integration ncbi-blast tripal
Last synced: 05 Apr 2025
https://github.com/tripal/mainlab_tripal
Mainlab Tripal Data Display: extending the display of a Tripal database
Last synced: 09 Apr 2025
https://github.com/tripal/chado_search
Mainlab Chado Search: enabling advanced search function for a Tripal/Chado database
Last synced: 09 Apr 2025
https://github.com/tripal/tripal_doc
Official Documentation for the Tripal Platform
documentation-site hacktoberfest tripal tripal-core tripal4
Last synced: 09 Apr 2025
https://github.com/tripal/trpdownload_api
An API for implementing download functionality.
Last synced: 05 Apr 2025
https://github.com/tripal/tripal_galaxy
This module is for integration of Tripal and a remote Galaxy Instance.
galaxy-project integration tripal
Last synced: 05 Apr 2025
https://github.com/tripal/tripal_analysis_go
This module is responsible for displaying reports from Gene Ontology (GO) analyses. This module contains a Gene Ontology Annotation Format (GAF) file loader to import GO terms assigned to features. Otherwise, GO assignments must already be loaded into the Tripal database using other data loaders (e.g. using the Tripal InterPro Analysis module or a GFF file)
analysis gene-ontology loader tripal
Last synced: 05 Apr 2025
https://github.com/tripal/tripal_analysis_interpro
This module extends the Tripal Analysis Module and provides a method for loading XML results from the InterProScan program. The module can load InterProScan XML v4 or InterProScan XML v5 generated from the command-line or web-based versions of InterProScan. Additionally, GO terms mapped by InterProScan can optionally be assigned to features.
analysis interproscan-xml loader tripal
Last synced: 05 Apr 2025
https://github.com/tripal/fields_generator
A composer tool for easily generating Tripal Fields
composer tripal tripal-developer-tools tripal3
Last synced: 06 Apr 2025
https://github.com/shreyas-a-s/oneclick-website-deployer
Bash script to install and setup a basic working drupal website with tripal module installed and activated.
bioinformatics biological-data cms-extension debian drupal linux tripal website
Last synced: 11 Feb 2025
https://github.com/tripal/t4d8
This is a temporary repository for Drupal 9 upgrade for Tripal v4. It is meant to house issues related to the upgrade.
drupal9 hacktoberfest tripal tripal4
Last synced: 11 Feb 2025
https://github.com/tripalcultivate/tripalcultivate-phenotypes
Provides generic support for large scale phenotypic data and traits with importers, content pages and visualizations.
phenotypic-data traits tripal tripal4 tripalcultivate
Last synced: 16 May 2025
https://github.com/tripal/private_biodata
Make individual pages private while others of the same Tripal Content Type remain public!
Last synced: 09 Apr 2025
https://github.com/tripal/tripal_simpletest
This module can be used to develop functional tests on Tripal extensions that can be run on an existing site without disturbing its content. It's compatible with Drupal native test system.
Last synced: 09 Apr 2025
https://github.com/tripal/tripal_network
Provides Tripal integration of biological networks including storage, loaders and visualzations
biological-networks loader tripal visualization
Last synced: 09 Apr 2025
https://github.com/tripal/trpfancy_fields
Provide additional fields to jazz up your Tripal Content Pages!
Last synced: 05 Apr 2025
https://github.com/tripal/tripal_analysis_unigene
DEPRECATED. This module is no longer needed for Tripal v3. Only major bug fixes will be considered for Tripal v2 sites that still use it. But, in summary, This module extends the Tripal v2 Analysis Module and provides visualization of Unigenes derived from ESTs.
Last synced: 09 Apr 2025
https://github.com/tripal/tripal_dt
An example module released during PAG 2017 hackathon, that displays a D3JS tree from the phylonode table.
d3js phylogenetic-trees tripal visualization
Last synced: 09 Apr 2025
https://github.com/tripal/tripal_example
An Examples module for Tripal Development
Last synced: 09 Apr 2025