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An open API service indexing awesome lists of open source software.

Projects in Awesome Lists by HenrikBengtsson

A curated list of projects in awesome lists by HenrikBengtsson .

https://github.com/henrikbengtsson/matrixstats

R package: Methods that Apply to Rows and Columns of Matrices (and to Vectors)

cran matrix package performance r vector

Last synced: 13 Apr 2025

https://github.com/HenrikBengtsson/matrixStats

R package: Methods that Apply to Rows and Columns of Matrices (and to Vectors)

cran matrix package performance r vector

Last synced: 22 Nov 2024

https://github.com/henrikbengtsson/startup

:wrench: R package: startup - Friendly R Startup Configuration

configuration cran environment-variables r startup utility

Last synced: 08 Apr 2025

https://github.com/HenrikBengtsson/startup

:wrench: R package: startup - Friendly R Startup Configuration

configuration cran environment-variables r startup utility

Last synced: 22 Nov 2024

https://github.com/henrikbengtsson/brother-ptouch-label-printer-on-linux

How to print to a Brother P-touch (PT) label printer on Linux

brother cli command-line documentation label-printer linux p-touch

Last synced: 05 Apr 2025

https://github.com/henrikbengtsson/wishlist-for-r

Features and tweaks to R that I and others would love to see - feel free to add yours!

bugs features oddities r suggestions troubleshooting tweaks wishlist

Last synced: 10 Apr 2025

https://github.com/HenrikBengtsson/Wishlist-for-R

Features and tweaks to R that I and others would love to see - feel free to add yours!

bugs features oddities r suggestions troubleshooting tweaks wishlist

Last synced: 22 Nov 2024

https://github.com/henrikbengtsson/speedtest-cli-extras

:signal_strength: Tools to enhance the speedtest-cli network tools

Last synced: 10 Apr 2025

https://github.com/HenrikBengtsson/speedtest-cli-extras

:signal_strength: Tools to enhance the speedtest-cli network tools

Last synced: 08 Apr 2025

https://github.com/henrikbengtsson/r.matlab

R package: R.matlab

matlab package r

Last synced: 07 Apr 2025

https://github.com/HenrikBengtsson/future.batchtools

:rocket: R package future.batchtools: A Future API for Parallel and Distributed Processing using batchtools

distributed-computing hpc job-scheduler package parallel pbs r sge slurm torque

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/dofuture

:rocket: R package: doFuture - Use Foreach to Parallelize via Future Framework

batchjobs batchtools biocparallel cran distributed-computing foreach hpc hpc-clusters package parallel plyr r

Last synced: 08 Dec 2024

https://github.com/henrikbengtsson/future.batchtools

:rocket: R package future.batchtools: A Future API for Parallel and Distributed Processing using batchtools

distributed-computing hpc job-scheduler package parallel pbs r sge slurm torque

Last synced: 08 Dec 2024

https://github.com/HenrikBengtsson/doFuture

:rocket: R package: doFuture - Use Foreach to Parallelize via Future Framework

batchjobs batchtools biocparallel cran distributed-computing foreach hpc hpc-clusters package parallel plyr r

Last synced: 04 Dec 2024

https://github.com/HenrikBengtsson/R.utils

🔧 R package: R.utils (this is *not* the utils package that comes with R itself)

cran package r

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/r.utils

🔧 R package: R.utils (this is *not* the utils package that comes with R itself)

cran package r

Last synced: 12 Apr 2025

https://github.com/henrikbengtsson/dirdf

R package: dirdf - Extracts Metadata from Directory and File Names

files metadata package r r-package rstats unconf unconf16

Last synced: 10 Apr 2025

https://github.com/HenrikBengtsson/dirdf

R package: dirdf - Extracts Metadata from Directory and File Names

files metadata package r r-package rstats unconf unconf16

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/x86-64-level

x86-64-level - Get the x86-64 Microarchitecture Level on the Current Machine

bash cpu linux microarchitecture tool x86-64

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/r.cache

:recycle: R package: R.cache - Fast and Light-weight Caching (Memoization) of Objects and Results to Speed Up Computations

cache cran memoization package r

Last synced: 19 Dec 2024

https://github.com/HenrikBengtsson/R.cache

:recycle: R package: R.cache - Fast and Light-weight Caching (Memoization) of Objects and Results to Speed Up Computations

cache cran memoization package r

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/profmem

🔧 R package: profmem - Simple Memory Profiling for R

cran memory-profiler package performance r ram

Last synced: 10 Apr 2025

https://github.com/HenrikBengtsson/profmem

🔧 R package: profmem - Simple Memory Profiling for R

cran memory-profiler package performance r ram

Last synced: 14 Mar 2025

https://github.com/henrikbengtsson/ucsf-vpn

Linux command-line client to manage a UCSF VPN connection

2fa cli client command-line duo linux openconnect ucsf vpn yubikey

Last synced: 10 Apr 2025

https://github.com/HenrikBengtsson/R.rsp

:page_facing_up: R package: Dynamic generation of scientific reports

cran document markup package r report reproducibility science

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/r.rsp

:page_facing_up: R package: Dynamic generation of scientific reports

cran document markup package r report reproducibility science

Last synced: 06 Apr 2025

https://github.com/henrikbengtsson/globals

🌐 R package: Identify Global Objects in R Expressions

code-inspection cran package r r-package

Last synced: 08 Dec 2024

https://github.com/henrikbengtsson/dotfiles-for-r

My dotfiles for R, e.g. .Rprofile and .Renviron

dotfiles r startup

Last synced: 10 Apr 2025

https://github.com/HenrikBengtsson/dotfiles-for-R

My dotfiles for R, e.g. .Rprofile and .Renviron

dotfiles r startup

Last synced: 04 Dec 2024

https://github.com/HenrikBengtsson/globals

🌐 R package: Identify Global Objects in R Expressions

code-inspection cran package r r-package

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/topdom

R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes

cran genomics hic package r topological-domains

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/r.oo

R package: R.oo - R Object-Oriented Programming with or without References

cran package r

Last synced: 07 Apr 2025

https://github.com/HenrikBengtsson/R.devices

🎨 R package: Unified Handling of Graphics Devices

graphics package r

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/shellcheck-repl

Validation of Shell Commands at the Prompt Before Evaluation

bash repl shell shellcheck validation

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/r.devices

🎨 R package: Unified Handling of Graphics Devices

graphics package r

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/rnativeapi

R package: RNativeAPI - Documentation and Examples of the R Native API (Proof of Concept)

api c documentation examples help native package r

Last synced: 10 Apr 2025

https://github.com/HenrikBengtsson/RNativeAPI

R package: RNativeAPI - Documentation and Examples of the R Native API (Proof of Concept)

api c documentation examples help native package r

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/future.mapreduce

[EXPERIMENTAL] R package: future.mapreduce - Utility Functions for Future Map-Reduce API Packages

futures map-reduce package r

Last synced: 08 Dec 2024

https://github.com/henrikbengtsson/future-tutorial-user2022

Tutorial: An Introduction to Futureverse for Parallel Processing in R (useR! 2022)

future futureverse parallel-processing r-language tutorial user2022

Last synced: 10 Apr 2025

https://github.com/HenrikBengtsson/future.tests

:nut_and_bolt: R package: future.tests - Test Suite for Future API Backends

future package r testing

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/future.tests

:nut_and_bolt: R package: future.tests - Test Suite for Future API Backends

future package r testing

Last synced: 08 Dec 2024

https://github.com/henrikbengtsson/article-bengtsson-future

H. Bengtsson, A Unifying Framework for Parallel and Distributed Processing in R using Futures, The R Journal, 10.32614/RJ-2021-048, 2021

article arxiv future hpc parallel-computing r r-package

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/aroma.affymetrix

🔬 R package: Analysis of Large Affymetrix Microarray Data Sets

affymetrix analysis copy-number dna expression hpc large-scale microarray notebook package r reproducibility rna

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/future.clustermq

:rocket: R package future.clustermq: A Future API for Parallel Processing using 'clustermq'

distributed-computing hpc lsf package parallel pbs r sge slurm torque

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/future.batchjobs

:rocket: R package: future.BatchJobs: A Future API for Parallel and Distributed Processing using BatchJobs [Intentionally archived on CRAN on 2021-01-08]

distributed-computing hpc job-scheduler package parallel parallel-computing pbs r sge slurm torque

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/fake-hdf5r

R package: hdf5r - Fake, Dummy, Non-Working 'hdf5r' Package for 'Seurat' Users

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/biocparallel.futureparam

:rocket: R package: BiocParallel.FutureParam - Use Futures with BiocParallel

bioconductor package parallel-programming r

Last synced: 08 Dec 2024

https://github.com/henrikbengtsson/conda-stage

conda-stage: Stage a Conda Environment on Local Disk

conda hpc parallel-filesystem performance

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/pscbs

🔬 R package: Analysis of Parent-Specific DNA Copy Numbers

package r

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/affxparser

🔬 R package: This is the Bioconductor devel version of the affxparser package.

bioconductor package r

Last synced: 20 Dec 2024

https://github.com/henrikbengtsson/future.aws.lambda

R package: future.aws.lambda - A Future API for Parallel Processing on AWS Lambda

aws-lambda future package parallel-computing r

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/cbi-software

A Scientific Software Stack for HPC (CentOS oriented)

Last synced: 15 Apr 2025

https://github.com/HenrikBengtsson/future.aws.lambda

R package: future.aws.lambda - A Future API for Parallel Processing on AWS Lambda

aws-lambda future package parallel-computing r

Last synced: 27 Nov 2024

https://github.com/henrikbengtsson/illuminaio

🔬 R package: This is the Bioconductor devel version of the illuminaio package.

bioconductor package r

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/environments

[experimental] R package: environments - Working with Environments and Closures in R

educational experminental package r

Last synced: 09 Apr 2025

https://github.com/HenrikBengtsson/rcli

R package: rcli - R Command-Line Interface Extras

addons build check cli command-line-interface package r

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/teeny

:hatching_chick: R package: teeny - A Minimal, Valid, Complete R Package

package r

Last synced: 10 Apr 2025

https://github.com/HenrikBengtsson/trackers

PROTOTYPE: trackers - Track Changes in R

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/trackers

PROTOTYPE: trackers - Track Changes in R

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/rcli

R package: rcli - R Command-Line Interface Extras

addons build check cli command-line-interface package r

Last synced: 28 Mar 2025

https://github.com/HenrikBengtsson/git-r

A Git Extension Making it Easier to Build R from Source

Last synced: 04 Dec 2024

https://github.com/HenrikBengtsson/fix.connections

R package: fix.connections - Workarounds for Deficiencies in R's Built-in Connections [PROTOTYPE]

package r

Last synced: 04 Dec 2024

https://github.com/HenrikBengtsson/revdepcheck.extras

R package: revdepcheck.extras - Reverse-Dependency Checks from the Command Line (CLI)

cli package r

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/revdepcheck.extras

R package: revdepcheck.extras - Reverse-Dependency Checks from the Command Line (CLI)

cli package r

Last synced: 08 Dec 2024

https://github.com/henrikbengtsson/topdomdata

R package: TopDomData - Data for the TopDom Package

example-data package r

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/git-r

A Git Extension Making it Easier to Build R from Source

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/fix.connections

R package: fix.connections - Workarounds for Deficiencies in R's Built-in Connections [PROTOTYPE]

package r

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/costellopscnseq

R package: Parent-specific Copy-number Estimation Pipeline using HT-Seq Data

copy-number ht-seq r

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/easycatfs

easycatfs - Easy Mounting of Slow Folders onto Local Disk

filesystem fuse fuse-filesystem hpc linux performance

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/pkgdown.extras

R package: pkgdown.extras: Enhancing the 'pkgdown' Package

documentation package pkgdown r

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/r_cran_booster

Chrome Extension: R CRAN Booster - adds useful annotations to CRAN package pages

chrome-extension cran firefox-addon package r

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/r-base-centos7

Docker container image: Centos 7 with R (UNDER CONSTRUCTION)

centos centos7 docker r

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/r.filesets

R package: R.filesets - Easy Handling of and Access to Files Organized in Structured Directories

cran files package r

Last synced: 10 Apr 2025

https://github.com/HenrikBengtsson/R.filesets

R package: R.filesets - Easy Handling of and Access to Files Organized in Structured Directories

cran files package r

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/jottr.org-blogdown

JottR - Some Jotter on R

Last synced: 15 Apr 2025

https://github.com/henrikbengtsson/aroma.light

🔬 R package: This is the Bioconductor devel version of the aroma.light package.

bioconductor package r

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/aroma.core

🔬 R package: aroma.core - Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework

cran package r

Last synced: 10 Apr 2025

https://github.com/henrikbengtsson/covr-utils

[LEGACY] Enhancements for covr making it even easier to do assess source-code coverage of R package tests

legacy r

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/aroma.cn

🔬 R package: aroma.cn

package r

Last synced: 08 Apr 2025

https://github.com/henrikbengtsson/calmate

🔬 R package: calmate - Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation

cran package r

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/markin

markin - The Markdown Injector

markdown r-package shell

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/r-mirrors

Mirror CRAN and Bioconductor repositories on the local file system for R package installaions without internet access

bioconductor cran hpc mirror packages r

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/amazonlinux-r-minimal

Docker Hub Image: docker pull henrikbengtsson/amazonlinux-r-minimal

aws aws-lambda docker r

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/bash-startup

Bash Startup utility functions

bash environment-variables files filter startup

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/future-tutorial-user2024

Futureverse tutorial at useR! 2024 conference, Switzerland, Austria

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/aroma.agilent

🔬 R package: aroma.agilent [DORMANT]

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/drat

R package repository

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/affx-fusion-sdk

:microscope: Affymetrix Fusion Software Developers Kit (SDK)

affymetrix sdk

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/sfit

R package: sfit - Multidimensional Simplex Fitting

c cone model package r simplex

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/future.api.tests

[PLANNED] R package future.api.tests: Conformance Tests for the Future API

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/dotfiles-for-emacs

Dot files for Emacs

Last synced: 28 Mar 2025

https://github.com/HenrikBengtsson/drat

R package repository

Last synced: 04 Dec 2024

https://github.com/henrikbengtsson/linuxenvironmentmodules

R package: LinuxEnvironmentModules - An R API to Linux Environment Modules

package r

Last synced: 28 Mar 2025

https://github.com/henrikbengtsson/r.methodss3

R package: R.methodsS3 - S3 Methods Simplified

cran package r

Last synced: 11 Apr 2025