https://github.com/joseph-ellaway/ramachandran_plotter

Program to plot a Ramachandran plot of all dihedral angles from a given PDB file. Background is empirically generated from the peptides in the Top8000 PDB data set.

dihedral-angles mmcif modern pdb peptides plot protein-data-bank protein-structure ramachandran ramachandran-plot structural-biology

Last synced: 19 Dec 2024

https://github.com/joseph-ellaway/per-residue-distance

Calculates the per-residue atomic distance between two proteins

bioinformatics bioinformatics-tool euclidean-distances gemmi matplotlib pdbe protein-structure rmsd structural-biology

Last synced: 05 Apr 2025

https://github.com/joseph-ellaway/python-basics-tutorial

Jupyter Notebooks for complete beginners to programming/Python

Last synced: 05 Apr 2025

https://github.com/joseph-ellaway/progress-bar

Progress bar for terminal (Python)

Last synced: 05 Apr 2025

https://github.com/joseph-ellaway/bio-mesa

Biomolecular multimodal ensemble structure aligner

Last synced: 05 Apr 2025