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Projects in Awesome Lists by heuermh

A curated list of projects in awesome lists by heuermh .

https://github.com/heuermh/leap-motion-processing

Leap Motion library for Processing

Last synced: 29 Oct 2024

https://github.com/heuermh/frames-processing

Frames animation library for Processing

Last synced: 29 Oct 2024

https://github.com/heuermh/gamepad-processing

Gamepad library for Processing.

Last synced: 29 Oct 2024

https://github.com/heuermh/adam-plugins

External plugins in Java and Scala for ADAM: Genomic Data System. Apache 2 licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/velocity-cli

Command line interface to Apache Velocity. Apache 2 licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/docker-linuxbrew-bio

Docker images of bioinformatics software built with Linuxbrew

Last synced: 29 Oct 2024

https://github.com/heuermh/spark-template

Template routes for Spark web framework

Last synced: 29 Oct 2024

https://github.com/heuermh/personal-genome-client

Java client for the 23andMe Personal Genome API.

Last synced: 29 Oct 2024

https://github.com/heuermh/dishevelled-bio

dishevelled.org bio

bioinformatics

Last synced: 29 Oct 2024

https://github.com/heuermh/dishevelled

dishevelled.org

Last synced: 29 Oct 2024

https://github.com/heuermh/piccolo2d-processing

Piccolo2D library for Processing.

Last synced: 29 Oct 2024

https://github.com/heuermh/midi-looper

MIDI looper library for Processing.

Last synced: 29 Oct 2024

https://github.com/heuermh/lickaudio

Virtual Eurorack Modules for VCV Rack

vcv-rack vcv-rack-modules vcv-rack-plugins vcvrack

Last synced: 29 Oct 2024

https://github.com/heuermh/adam-examples

Examples in Java and Scala for ADAM: Genomic Data System. Apache 2 licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/bh20-workflows-bhxiv

Workflows topic group BioHackathon 2020 mini-publication for https://BioHackrXiv.org

Last synced: 29 Oct 2024

https://github.com/heuermh/java-gcon

Genome connector APIs

Last synced: 29 Oct 2024

https://github.com/heuermh/executor-processing

Executor library for Processing

Last synced: 29 Oct 2024

https://github.com/heuermh/ensembl-rest-client

Java client for the Ensembl REST API.

Last synced: 29 Oct 2024

https://github.com/heuermh/bdg-nextflow

Workflows implemented via Nextflow. Apache 2 licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/monome-emulator

Monome emulator written in Processing.

Last synced: 29 Oct 2024

https://github.com/heuermh/adam-gfa

Graphical Fragment Assembly (GFA) support for ADAM. Licensed LGPL version 3 or later.

Last synced: 29 Oct 2024

https://github.com/heuermh/duckdb-parquet-tools

Apache Parquet format tools for DuckDB.

cli command-line command-line-tool duckdb jdbc parquet

Last synced: 29 Oct 2024

https://github.com/heuermh/disq-adam

Last synced: 29 Oct 2024

https://github.com/heuermh/bdg-formats-duckdb

Convert bdg schema in Apache Parquet format using DuckDB

Last synced: 29 Oct 2024

https://github.com/heuermh/variation-cytoscape3-app

Git mirror of dishevelled.org variation-cytoscape3-app

Last synced: 29 Oct 2024

https://github.com/heuermh/hook

The longshoreman's hook was historically used by longshoremen (stevedores).

Last synced: 29 Oct 2024

https://github.com/heuermh/minnebar15-workflow

Nextflow workflow for Minnebar15 presentation

Last synced: 29 Oct 2024

https://github.com/heuermh/sparkling

Hard fork of perwendel/spark

Last synced: 29 Oct 2024

https://github.com/heuermh/sars-cov-2

SARS-CoV-2 (Severe acute respiratory syndrome coronavirus 2) sequences and features

Last synced: 29 Oct 2024

https://github.com/heuermh/googlegenomics-mapreduce-java

Uses the Java MapReduce for Google App Engine to create a variant similarity matrix and run PCA.

Last synced: 29 Oct 2024

https://github.com/heuermh/phenopacket-protobuf

Protobuf support for phenopackets

Last synced: 29 Oct 2024

https://github.com/heuermh/github-changes-maven-plugin

Maven changes plugin for GitHub hosted repositories. Apache 2 licensed.

changelog-generator github java maven maven-plugin

Last synced: 29 Oct 2024

https://github.com/heuermh/adam-dishevelled-bio

dishevelled-bio on Spark via ADAM pipe APIs

Last synced: 29 Oct 2024

https://github.com/heuermh/adam-python

Last synced: 29 Oct 2024

https://github.com/heuermh/googlegenomics-api-provider-local-java

Implements the Google Genomics API locally, reading its data from local BAM files.

Last synced: 29 Oct 2024

https://github.com/heuermh/ensembl-mart-runner

Ensembl Mart runner.

bioinformatics

Last synced: 29 Oct 2024

https://github.com/heuermh/dishevelled-bio-nextflow

dsh-bio workflow processes implemented via Nextflow DSL1. Apache 2 licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/venneuler

Source mirror of unreleased venneuler artifact.

Last synced: 29 Oct 2024

https://github.com/heuermh/dotfiles

Last synced: 29 Oct 2024

https://github.com/heuermh/docker-chuck

Docker images for ChucK and related libraries.

Last synced: 29 Oct 2024

https://github.com/heuermh/boxes-processing

Boxes library for Processing.

Last synced: 29 Oct 2024

https://github.com/heuermh/brew-apache-spark-switcher

Apache Spark Homebrew switch script

Last synced: 29 Oct 2024

https://github.com/heuermh/biojava-bosc2016

BioJava project BOSC 2016 abstract

Last synced: 29 Oct 2024

https://github.com/heuermh/biojava-legacy-adam

BioJava 1.x (biojava-legacy) and ADAM integration.

Last synced: 29 Oct 2024

https://github.com/heuermh/benchmarks

Benchmarks for genomics libraries on Apache Spark. Apache 2 licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/adam-r

Last synced: 29 Oct 2024

https://github.com/heuermh/sea-eagle

Command line tools for AWS Athena.

athena cli command-line command-line-tool tui

Last synced: 29 Oct 2024

https://github.com/heuermh/bdg-convert-ga4gh

Conversions between GA4GH Protobuf and Big Data Genomics Avro Formats. Apache 2 licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/adam-snpeff

SnpEff on Spark via ADAM pipe APIs

Last synced: 29 Oct 2024

https://github.com/heuermh/artic

UNDER CONSTRUCTION: nf-core ARTIC field bioinformatics pipeline

Last synced: 29 Oct 2024

https://github.com/heuermh/cooper

Command line tools for AWS s3.

Last synced: 29 Oct 2024

https://github.com/heuermh/nameless

Last synced: 29 Oct 2024

https://github.com/heuermh/nf-core-hlatyping2

DSL2 rewrite of nf-core/hlatyping workflow

Last synced: 29 Oct 2024

https://github.com/heuermh/lick-ios

iOS app template with libchuck and LiCK

Last synced: 29 Oct 2024

https://github.com/heuermh/hartwigmedical-pipeline2

Next generation pipeline used to process FASTQ and produce meaningful genomic data. Currently experimental and not intended for production use.

Last synced: 29 Oct 2024

https://github.com/heuermh/googlegenomics-protobufs

Protobuf files used to represent data in the Google Genomics APIs.

Last synced: 29 Oct 2024

https://github.com/heuermh/osc-looper

OSC looper library for Processing.

Last synced: 29 Oct 2024

https://github.com/heuermh/adam-pheno

Phenotypes for ADAM: Genomic Data System. Apache 2 licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/hca-matrix-service-client

Client for the Human Cell Atlas Matrix Service API. MIT licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/adam-commands

External commands in Java and Scala for ADAM: Genomic Data System. Apache 2 licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/adam-explorer

Interactive explorer for ADAM genomics data models. Apache 2 licensed.

Last synced: 29 Oct 2024

https://github.com/heuermh/homebrew-parquet-tools

Homebrew formulae for Parquet related tools.

Last synced: 29 Oct 2024