Projects in Awesome Lists by jamesmbaazam
A curated list of projects in awesome lists by jamesmbaazam .
https://github.com/jamesmbaazam/modeling_infectious_diseases_in_humans_and_animals_r_programs
R code for all the programs in the book "Modeling infectious diseases in humans and animals by Keeling and Rohani
Last synced: 19 Feb 2025
https://github.com/jamesmbaazam/rpkgdev
Provides resources and a compendium of commands (mostly from devtools and usethis) for developing R packages. Most of the commands come from Hadley's R Packages book.
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/mppr
Materials for the in-person "Modelling for Pandemic Preparedness and Response" Modular Shortcourse
infectious-disease-dynamics infectious-disease-modeling rstats
Last synced: 19 Feb 2025
https://github.com/jamesmbaazam/intro-to-idd-modelling
Introduction to Infectious Disease Modelling
Last synced: 10 Apr 2025
https://github.com/jamesmbaazam/two_strain_orv_model
Infection mitigation in the context of co-existing strains of the same pathogen.
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/presentations
A storehouse for all my presentation slides.
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/orv_modelling_review_epidemics
Mechanistic modelling of outbreak response interventions to human vaccine-preventable diseases: a systematic review of modelling practices before COVID-19
epidemiological-modelling mathematical-modelling mathematical-models mechanistic-models outbreak-response-modelling systemaric-review
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/orv_models_review
Data and scripts for analysing data extracted from papers for a review of models used to evaluate the impact of outbreak response of human vaccine-preventable diseases and foot and mouth disease in livestock.
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/smart
Practice exercises for the SACEMA Modelling and Analytics Response Team (SMART) meetings.
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/sacema-smarties
This repository contains all the code and resources for SACEMA's Rapid Response Team activities including assignments
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/sa_rabies_exploration
Exploring Historical Rabies in South Africa
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/epiparameterdashboard
A dashboard for visualising the epidemiological parameters stored in the epiparameter package.
epidemiological-delay-distribution epidemiological-modelling epidemiology infectious-disease-models r-package rshinydashboard rstats-package
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/tidytuesday
A repository to contain my tidy Tuesday submissions on twitter. This will also be a repository to showcase my visualizations.
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/published_article_codes
Codes from published articles
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/quartopresentationtemplate
My Quarto Presentation Template
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/measles_orv_strategies
This repository contains code for a project on assessing various measles outbreak response vaccination strategies. The assessments will be done based on the logistical (cold chain) needs in terms of ice packs, freezing times for ice packs, and passive cold chain requirements for vaccination teams.
epidemiology logistics modeling modeling-and-simulation modelling modelling-framework supply-chain vaccine vaccinesupplychain
Last synced: 07 Apr 2025
https://github.com/jamesmbaazam/data_science_skills_practice
Contains my learning material and practice files for data science and machine learning concepts.
Last synced: 02 Apr 2025
https://github.com/jamesmbaazam/learning_practice
Notebooks, code, and notes from learning various concepts
Last synced: 02 Apr 2025