Ecosyste.ms: Awesome

https://github.com/rajeshrinet/pyross

PyRoss: inference, forecasts, and optimised control of epidemiological models in Python. github.com/rajeshrinet/pyross

compartment-models coronavirus covid-19 epidemic-simulations epidemiological-models epidemiological-predictions infectious-disease-models pyross sars-cov-2

Last synced: 08 Nov 2024

https://github.com/cdcgov/pyrenew

Python package for statistical inference and forecast of epi models using multiple signals

epidemiology infectious-disease-models package renewal-process

Last synced: 08 Nov 2024

https://github.com/roche/covid-hcru-model

Supplemental appendix containing detailed mathematical description, methodology, and R code for modeling disease transmission, healthcare resource utilization, and mortality during the COVID-19 pandemic in the US using observed data from The COVID Tracking Project.

covid-19 covid-testing covid-treatment infectious-disease-models particle-filtering

Last synced: 13 Nov 2024

https://github.com/babak2/outbreak_analyser

infectious-disease-models matplotlib numpy outbreak-data-analysis outbreak-detection python3

Last synced: 15 Oct 2024

https://github.com/jamesmbaazam/epiparameterdashboard

A dashboard for visualising the epidemiological parameters stored in the epiparameter package.

epidemiological-delay-distribution epidemiological-modelling epidemiology infectious-disease-models r-package rshinydashboard rstats-package

Last synced: 27 Oct 2024

https://github.com/gauravcodepro/odd-ratio-estimator

This function will take a data frame of the outbreak and will predict the odd ratios and the specific likelihood of occurrence of the disease in that specific geographical location

genomic-data-analysis genomics-data infectious-disease-models infectious-diseases odds-ratio python risk-analysis risk-assessment risk-management

Last synced: 09 Nov 2024

https://github.com/gauravcodepro/bacterial-model-fractions

This repository contains the risk model function of the disease model in virbrio infections and how can be modeled to estimate the attributable rates

infectious-disease-models infectious-diseases modelling outbreak-analysis outbreak-data-analysis outbreak-detection python risk-analysis vibrio-cholerae

Last synced: 09 Nov 2024