Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists tagged with sars-cov-2
A curated list of projects in awesome lists tagged with sars-cov-2 .
https://github.com/owid/covid-19-data
Data on COVID-19 (coronavirus) cases, deaths, hospitalizations, tests • All countries • Updated daily by Our World in Data
coronavirus covid covid-19 sars-cov-2
Last synced: 01 Aug 2024
https://github.com/neherlab/covid19_scenarios
Models of COVID-19 outbreak trajectories and hospital demand
coronavirus covid covid-19 data hospital model modelling ncov neherlab open-source opensource outbreak population research sars-cov-2 science simulation ventilator
Last synced: 30 Sep 2024
https://github.com/nextstrain/ncov
Nextstrain build for novel coronavirus SARS-CoV-2
ncov nextstrain pathogen sars-cov-2
Last synced: 01 Aug 2024
https://github.com/lindawangg/covid-net
COVID-Net Open Source Initiative
chest-radiography coronavirus coronavirus-dataset coronavirus-detect covid-19 covid-net covidx-dataset sars-cov-2
Last synced: 30 Sep 2024
https://github.com/FoldingAtHome/coronavirus
Folding@home COVID-19 efforts
covid-19 folding-at-home foldingathome molecular-dynamics sars-cov-2
Last synced: 01 Aug 2024
https://github.com/foldingathome/coronavirus
Folding@home COVID-19 efforts
covid-19 folding-at-home foldingathome molecular-dynamics sars-cov-2
Last synced: 30 Sep 2024
https://github.com/makers-for-life/makair
🫁 The world's first open-source ventilator tested on human patients. Mass-producible at a low cost (~2000€).
ards cad coronavirus covid covid-19 covid-respirator electronics fusion-360 makair-respirators medical nucleo-board sars-cov-2
Last synced: 31 Jul 2024
https://github.com/ryansmcgee/seirsplus
Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.
coronavirus covid covid-19 epidemic-model epidemic-simulations epidemics epidemiology epidemiology-analysis sars-cov-2
Last synced: 02 Aug 2024
https://github.com/je-suis-tm/graph-theory
Julia and Python complex system applications in ecology, epidemiology, sociology, economics & finance; network science models including Bianconi-Barabási, Barabási-Albert, Watts-Strogatz, Waxman Model & Erdős-Rényi; graph theory algorithms involving Gillespie, Bron Kerbosch, Ramsey, Bellman Ford, A*, Kruskal, Borůvka, Prim, Dijkstra, DSatur, Randomized Distributed, Vizing, Topological Sort, DFS, BFS
agent-based-modeling agent-based-simulation barabasi-albert bianconi-barabasi compartmental-model complex-network complex-systems dynamic-network dynamic-system epidemic-model graph-coloring graph-theory maximal-cliques minimum-spanning-tree minimum-spanning-trees random-graph sars-cov-2 sir-model spatial-models watts-strogatz
Last synced: 31 Jul 2024
https://github.com/hodcroftlab/covariants
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
covid-19 covid19 mutation mutation-distribution nextstrain sars-cov-2 sarscov2 tracking variants
Last synced: 30 Jul 2024
https://github.com/ababaian/serratus
Ultra-deep search for novel viruses
aws bioinformatics coronavirus covid19 open-science sars-cov-2
Last synced: 03 Aug 2024
https://github.com/WeileiZeng/Open-Source-COVID-19
A global collection of Open Source projects during COVID-19
2019-ncov awesome-coronavirus awesome-covid-19 china coronavirus covid-19 iran italy japan korea mainland-china ncov open-source open-source-covid open-source-wuhan sars-cov-2 world wuhan
Last synced: 01 Aug 2024
https://github.com/nextstrain/nextclade
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
clade clades coronavirus covid covid-19 covid19 dna influenza ncov neherlab next-generation-sequencing nextstrain research rna sars-cov-2 science sequences sequencing strain virus
Last synced: 06 Aug 2024
https://github.com/robert-koch-institut/COVID-19-Impfungen_in_Deutschland
Die COVID-19-Impfung kann einen Wendepunkt in der Kontrolle der COVID-19-Pandemie darstellen und erfährt daher hohes Maß an öffentlicher Aufmerksamkeit. Einführung und Umsetzung der COVID-19-Impfung gehen mit besonderen Herausforderungen einher, die bei der Impfdatenerfassung zu berücksichtigen sind. In diesem Kontext ist es Ziel des Projekts 'D...
covid-19 deutschland germany impfschutz-deckungsgrad mass-vaccination massenimpfung offene-daten open-data rki sars-cov-2 vaccination vaccination-coverage vakzination
Last synced: 01 Aug 2024
https://github.com/Project-Evidence/project-evidence.github.io
Evidence SARS-CoV-2 Emerged From a Biological Laboratory in Wuhan, China
archive pathology sars-cov-2 scribble
Last synced: 04 Aug 2024
https://github.com/OpenGene/fastv
An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19.
2019-ncov bioinformatics coronavirus covid covid-19 hcov meta-genomics microbial-sequences mngs ngs sars-cov-2 sequencing viral viral-infectious-diseases virus visualization
Last synced: 03 Aug 2024
https://github.com/bluebrain/bioexplorer
The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration
astrocyte brain coronavirus covid19 dti glucose-levels immune-system molecular-biology neuroimaging neuron neurosimulation python raytracing rendering-engine sars-cov-2 science vasculature viral-infection virology virus
Last synced: 27 Sep 2024
https://boogheta.github.io/coronavirus-countries/
COVID-19 interactive dashboard for the whole world
2019-ncov coronavirus covid-19 d3js dashboard ncov open-source open-source-covid sars-cov-2 vuejs
Last synced: 02 Aug 2024
https://github.com/Big-Life-Lab/PHES-ODM
The Public Health Environmental Surveillance Open Data Model (PHES-ODM, or ODM). A data model, dictionary and support tools for environmental surveillance.
covid-19 covid19 data-dictionary metadata naming-conventions odm sars-cov-2 vocabulary wastewater
Last synced: 08 Aug 2024
https://github.com/covid19cuba/covid19cuba-app
Mobile application of Covid19 Cuba Data project implemented with Flutter
covid-19 covid19 covid19cubadata cuba flutter flutter-app flutter-application mobile-app mobile-application sars-cov-2
Last synced: 30 Jul 2024
https://github.com/mponce0/covid19.analytics
R package to obtain and analyze live data from the nCOVID19 coronavirus
covid19 covid19-data ncov2019 r sars-cov-2
Last synced: 30 Sep 2024
https://github.com/pwr22/covbot
Matrix bot tracking SARS-COV-2 statistics.
bot coronavirus covid-19 matrix maubot python sars-cov-2
Last synced: 01 Aug 2024