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Projects in Awesome Lists tagged with protein-alignment
A curated list of projects in awesome lists tagged with protein-alignment .
https://github.com/nolantrem/sars-cov-protein-finding
FASTA Alignment search for BsaI and BsmBI restriction sites in the ORF6 protein to verify assertions made by Bruttel, et. al. in "Endonuclease fingerprint indicates a synthetic origin of SARS-CoV-2."
computational-biology protein-alignment sars-cov-2
Last synced: 05 Dec 2024
https://github.com/gauravcodepro/coding-stitcher-pangenome
a coding sticher for genome annotations, which stitch all your coding regions coming out of the exon alignments and will produce the gene visualization for the pangenome
annotation-tool bioinformatics bioinformatics-algorithms genome-alignment genome-annotation protein-alignment protein-sequences
Last synced: 09 Nov 2024
https://github.com/applicativesystem/protein-alignment
protein alignment gem from alignment to graphs
bioinformatics genome-alignment genome-analysis genome-anntoation-analysis genome-protein-alignment protein-alignment protein-annotation-analysis ruby rubylang rubylanguage
Last synced: 16 Dec 2024
https://github.com/applicativesystem/miniprot-analyzer
miniprot protein analyzer
bioinformatics genome-analysis genome-annotation protein-alignment protein-alignments protein-sequences
Last synced: 16 Dec 2024
https://github.com/applicativesystem/paf-plotter
formatting paf output alignments and plotting the paf alignments stats
bioinformatics genome-alignment genome-alignments genome-analysis genome-annotation paf protein-alignment protein-alignments
Last synced: 16 Dec 2024
https://github.com/applicativesystem/maf-analyzer-awk
maf alignments from protein to genome alignments using awk
awk awk-programming-language awk-script bioinformatics genome-alignment genome-analysis genome-anntoation protein-alignment protein-alignments
Last synced: 16 Dec 2024
https://github.com/applicativesystem/miniprot-protein-annotator
miniprot protein alignment analyzer
bioinformatics genome-alignment genome-analysis genome-annotation genome-bioinformatics genome-informatics protein-alignment
Last synced: 16 Dec 2024
https://github.com/applicativesystem/intergenic-extractor
intergenic region analyzer from protein alignments to draft genomes.
alignment bioinformatics genome-alignment genome-alignments genome-analysis genome-annotation protein-alignment protein-ligand-interactions
Last synced: 16 Dec 2024
https://github.com/applicativesystem/genome-alignment
genome and transcriptome alignment extraction
bioinformatics genome-alignment genome-alignments genome-analysis protein-alignment protein-alignments protein-genome-alignment
Last synced: 16 Dec 2024
https://github.com/applicativesystem/coding-stitcher-pangenome
stitching coding regions from exon alignments for the protein to genome alignments.
bioinformatics genome-alignment genome-alignments genome-annotation gff-toolkit gff3 gff3-format protein-alignment protein-alignments
Last synced: 16 Dec 2024
https://github.com/applicativesystem/compleasm-awk
compleasm genome coverage analysis using awk
awk awk-programming-language awk-script bioinformatics genome-alignment genome-alignment-utilites genome-analysis genome-annotation genome-annotation-analysis protein-alignment
Last synced: 16 Dec 2024
https://github.com/rvhonorato/cealign
Implementation of the Combinatorial Extension (cealign) algorithm to align protein structures
protein-alignment rust structural-biology
Last synced: 03 Dec 2024
