https://github.com/jarnorfb/epysurv

Epidemiological surveillance in Python

epidemiology outbreak-detection surveillance

Last synced: 07 Mar 2026

https://github.com/bu-isciii/taranys

cg/wgMLST allele calling software, schema evaluation and allele distance estimation for outbreak reserch.

bacterial-genomes cgmlst mlst outbreak-data-analysis outbreak-detection sequencing wgmlst

Last synced: 05 Apr 2025

https://github.com/bu-isciii/bacterial_wgs_training

In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.

bacterial-genomes bacterial-wgs-training genome nextflow ngs-analysis outbreak-detection outbreaks sequencing wgs wgs-analysis

Last synced: 10 Feb 2026

https://github.com/geraked/complex-networks

Implementation of Complex Networks Algorithms

amirkabir-university community-detection complex-network complex-networks complex-networks-from-scratch complex-neural-networks cs224w geraked gnn graph-algorithms graph-neural-networks heterogeneous-graph-neural-network influence-maximization outbreak-detection rabist spectral-clustering

Last synced: 25 Jun 2026

https://github.com/babak2/outbreak_analyser

infectious-disease-models matplotlib numpy outbreak-data-analysis outbreak-detection python3

Last synced: 03 May 2026