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Projects in Awesome Lists by jokergoo

A curated list of projects in awesome lists by jokergoo .

https://github.com/jokergoo/complexheatmap

Make Complex Heatmaps

clustering complex-heatmaps heatmap

Last synced: 14 Oct 2024

https://github.com/jokergoo/ComplexHeatmap

Make Complex Heatmaps

clustering complex-heatmaps heatmap

Last synced: 02 Aug 2024

https://github.com/jokergoo/circlize

Circular visualization in R

Last synced: 14 Oct 2024

https://github.com/jokergoo/enrichedheatmap

make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.

Last synced: 30 Oct 2024

https://github.com/jokergoo/EnrichedHeatmap

make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.

Last synced: 02 Aug 2024

https://github.com/jokergoo/spiralize

Visualize data on spirals

Last synced: 30 Oct 2024

https://github.com/jokergoo/interactivecomplexheatmap

Make Interactive Complex Heatmaps

interactive-heatmaps

Last synced: 30 Oct 2024

https://github.com/jokergoo/simplifyenrichment

Simplify functional enrichment results

Last synced: 30 Oct 2024

https://github.com/jokergoo/rgreat

GREAT Analysis - Functional Enrichment on Genomic Regions

Last synced: 14 Oct 2024

https://github.com/jokergoo/cola

A General Framework for Consensus Partitioning

consensus-clustering

Last synced: 14 Oct 2024

https://github.com/jokergoo/pkgndep

Analyzing Dependency Heaviness of R Packages

Last synced: 14 Oct 2024

https://github.com/jokergoo/hilbertcurve

Visualize genomic data by Hilbert curve

Last synced: 30 Oct 2024

https://github.com/jokergoo/gtrellis

Genomic plot in trellis layout

Last synced: 14 Oct 2024

https://github.com/jokergoo/circlize_book

Documentation for circlize package

Last synced: 14 Oct 2024

https://github.com/jokergoo/bsub

Send R code/R scripts/shell commands to LSF cluster without leaving R

Last synced: 14 Oct 2024

https://github.com/jokergoo/complexheatmap-reference

Documentation of ComplexHeatmap package

Last synced: 14 Oct 2024

https://github.com/jokergoo/getoptlong

Parse command-line arguments and simple variable interpolation

Last synced: 14 Oct 2024

https://github.com/jokergoo/circlize_examples

circlize examples

Last synced: 14 Oct 2024

https://github.com/jokergoo/biocartaimage

BioCarta pathway images

Last synced: 14 Oct 2024

https://github.com/jokergoo/biomartgogenesets

Gene Ontology Gene Sets from BioMart

Last synced: 14 Oct 2024

https://github.com/jokergoo/globaloptions

Generate function to get or set global options

Last synced: 14 Oct 2024

https://github.com/jokergoo/jokergoo

Last synced: 14 Oct 2024

https://github.com/jokergoo/GlobalOptions

Generate function to get or set global options

Last synced: 13 Aug 2024

https://github.com/jokergoo/simona

Semantic Similarity in Bio-Ontologies

Last synced: 14 Oct 2024

https://github.com/jokergoo/crypt-dnasequence

Encrypt and decrypt strings to DNA Sequences

Last synced: 14 Oct 2024

https://github.com/jokergoo/ngspipeline

NGS pipeline

Last synced: 14 Oct 2024

https://github.com/jokergoo/cola_hcp

Hierarchical Consensus Partitioning

Last synced: 14 Oct 2024

https://github.com/jokergoo/spiralize_vignettes

Vignettes of the spiralize package

Last synced: 14 Oct 2024

https://github.com/jokergoo/jokergoo.github.io

Personal website

Last synced: 14 Oct 2024

https://github.com/jokergoo/pheatmap2

pretty and parallel heatmap

Last synced: 14 Oct 2024

https://github.com/jokergoo/cepa

Centrality-based pathway enrichment

Last synced: 14 Oct 2024

https://github.com/jokergoo/cola_examples

Examples of cola analysis

Last synced: 14 Oct 2024

https://github.com/jokergoo/genesummary

RefSeq gene summary

Last synced: 14 Oct 2024

https://github.com/jokergoo/uniprotkeywords

Keywords from the UniProt database

Last synced: 14 Oct 2024

https://github.com/jokergoo/cola_manuscript

Scripts for the cola manuscript

Last synced: 14 Oct 2024

https://github.com/jokergoo/cotools

NGS tools for Conputational Oncology group in DKFZ

Last synced: 14 Oct 2024

https://github.com/jokergoo/simplifyenrichment_supplementary

Supplementary for simplifyEnrichment manuscript

Last synced: 14 Oct 2024

https://github.com/jokergoo/sfcurve

2x2, 3x3 and nxn Space-Filling Curves

Last synced: 14 Oct 2024

https://github.com/jokergoo/list-vectorize

vectorized functions in perl

Last synced: 14 Oct 2024

https://github.com/jokergoo/gtf

Simple class to process GTF data

Last synced: 14 Oct 2024

https://github.com/jokergoo/top2pct_scientists

top2pct_scientists

Last synced: 14 Oct 2024

https://github.com/jokergoo/gsubeval

Substitute with an Evaluated Expression

Last synced: 14 Oct 2024

https://github.com/jokergoo/simplifyenrichment_manuscript

Scripts for the analysis in simplifyEnrichment manuscript

Last synced: 14 Oct 2024

https://github.com/jokergoo/statistics-multtest

Control false discovery rate in multiple test

Last synced: 14 Oct 2024

https://github.com/jokergoo/epik

Integrative analysis for epigenomic sequencing data

integrative-analysis

Last synced: 14 Oct 2024

https://github.com/jokergoo/microarray-geo-soft

Reading microarray data in SOFT format from GEO database

Last synced: 14 Oct 2024

https://github.com/jokergoo/colorramp2

Generate Color Mapping Functions

Last synced: 14 Oct 2024

https://github.com/jokergoo/bsub_vignettes

Vignettes for the bsub package

Last synced: 14 Oct 2024

https://github.com/jokergoo/cola_supplementary

Supplementary for cola manuscript

Last synced: 14 Oct 2024

https://github.com/jokergoo/epik.cmd

Command line interface to epik package

Last synced: 14 Oct 2024

https://github.com/jokergoo/cola_vignettes

Vignettes of the cola package

Last synced: 14 Oct 2024

https://github.com/jokergoo/hgnc

Last synced: 14 Oct 2024

https://github.com/jokergoo/rgreat_suppl

Supplementary files for the rGREAT manuscript

Last synced: 14 Oct 2024

https://github.com/jokergoo/cola_collection

A collection of cola analysis

Last synced: 14 Oct 2024

https://github.com/jokergoo/pkgndep.db

Data package for pkgndep

Last synced: 14 Oct 2024

https://github.com/jokergoo/pkgndep_suppl

Supplementary files for the pkgndep paper

Last synced: 14 Oct 2024

https://github.com/jokergoo/gsea_book

Last synced: 14 Oct 2024

https://github.com/jokergoo/rgreat_genesets

Genesets and gene coordinates for a lot of organisms

Last synced: 14 Oct 2024

https://github.com/jokergoo/pairtrim

Trim pair-end FastQ files

Last synced: 14 Oct 2024

https://github.com/jokergoo/rhydrogen

translate comments to documentation in R

Last synced: 14 Oct 2024