Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists by seananderson
A curated list of projects in awesome lists by seananderson .
https://github.com/seananderson/glmm-course
Workshop exercises on regression, GLMs, mixed-effects models, and GLMMs in R
Last synced: 02 Nov 2024
https://github.com/seananderson/glmmfields
R package for Bayesian spatial and spatiotemporal GLMMs with possible extremes
ecology extremes r spatial-analysis spatiotemporal
Last synced: 02 Nov 2024
https://github.com/seananderson/bst
BibTeX style files for ecology journals
Last synced: 26 Oct 2024
https://github.com/seananderson/covidseir
Bayesian SEIR model to estimate the effects of social-distancing on COVID-19
Last synced: 02 Nov 2024
https://github.com/seananderson/bayes-course
An introduction to Bayesian data analysis with Stan (a work in progress)
Last synced: 02 Nov 2024
https://github.com/seananderson/seananderson.ca
Hugo backend to my personal site, CV, and blog
Last synced: 26 Oct 2024
https://github.com/seananderson/heavy-tails
Black-swan events in animal populations
Last synced: 26 Oct 2024
https://github.com/seananderson/ggsidekick
Helper function(s) for ggplot2. [Only theme_sleek() for now.]
Last synced: 26 Oct 2024
https://github.com/seananderson/ggplot2-fish554
Course notes and exercises on ggplot2 for the FISH554 class at the University of Washington
Last synced: 26 Oct 2024
https://github.com/seananderson/multivariate-stan
Experimenting with multivariate regression in Stan
Last synced: 26 Oct 2024
https://github.com/seananderson/pandoc-template
An example manuscript setup in Pandoc
Last synced: 26 Oct 2024
https://github.com/seananderson/spatial-extremes
Code for 'Black swans in space: modelling spatiotemporal processes with extremes'
Last synced: 26 Oct 2024
https://github.com/seananderson/ramlegacy
R package to download, import, convert, and cache the RAM Legacy Stock Assessment Database
database fisheries r r-package
Last synced: 26 Oct 2024
https://github.com/seananderson/ecology-trends
Analysis for a paper on trends in ecology and conservation through 8 decades
Last synced: 26 Oct 2024
https://github.com/seananderson/aenea-grammars
Grammars for Aenea / Dragonfly
Last synced: 26 Oct 2024
https://github.com/seananderson/negbin-stan
Playing with negative binomial multilevel models in Stan
Last synced: 26 Oct 2024
https://github.com/seananderson/paleobaselines
Paleontological baselines for evaluating extinction risk in the modern oceans
Last synced: 26 Oct 2024
https://github.com/seananderson/kbm-macros
Keyboard Maestro macros for macOS voice control / voice coding
Last synced: 26 Oct 2024
https://github.com/seananderson/dplyr-intro-2014
dplyr and pipes introduction for stats beerz
Last synced: 26 Oct 2024
https://github.com/seananderson/ecofolio
R package for measuring ecological portfolio effects
Last synced: 26 Oct 2024
https://github.com/seananderson/stanhelpers
Helper functions for Stan/rstan
Last synced: 26 Oct 2024
https://github.com/seananderson/metafolio
Simulate metapopulations for portfolio optimization
Last synced: 26 Oct 2024
https://github.com/seananderson/rtmb-tesa-spatial
Exercises for a workshop on geostatistical modelling with RTMB + GMRFs
Last synced: 26 Oct 2024
https://github.com/seananderson/sdmtmb-paper
Paper describing the sdmTMB R package
Last synced: 26 Oct 2024
https://github.com/seananderson/tesa-ggplot
Materials from a webinar on ggplot2 for the Technical Expertise in Stock Assessment program
Last synced: 26 Oct 2024
https://github.com/seananderson/robustmeta
R package for robust random-effect meta-regression with dependent effect sizes
Last synced: 26 Oct 2024
https://github.com/seananderson/clusterthat
Clustering tools for fisheries stock assessment ensembles
Last synced: 26 Oct 2024
https://github.com/seananderson/jackets
R package for manipulating and plotting yellow jacket RFID data
Last synced: 26 Oct 2024
https://github.com/seananderson/fsardown
Experiments with generating reproducible FSARs (Fisheries Science Advice Report) documents
Last synced: 26 Oct 2024
https://github.com/seananderson/dplyr-ggplot-intro-2017
Material for workshops on dplyr and ggplot2
Last synced: 26 Oct 2024
https://github.com/seananderson/ss3sim-cases
ss3sim case files; currently contains case files from UW FISH 600 papers
Last synced: 26 Oct 2024
https://github.com/seananderson/citations-talk
Notes for a talk on citations and citation managers
Last synced: 26 Oct 2024
https://github.com/seananderson/burn-severity
Calibration model for burn severity from satellite indices (with a Bayesian ZOIB model)
Last synced: 26 Oct 2024
https://github.com/seananderson/heavy-tails-response
Code for 'Migration and population growth rate in animal black-swan events'
Last synced: 26 Oct 2024
https://github.com/seananderson/com-review
A review of catch-only fisheries models
Last synced: 26 Oct 2024
https://github.com/seananderson/surprise
A perspectives paper on surprise and black-swan events in fisheries science
Last synced: 26 Oct 2024
https://github.com/seananderson/portfolio-review
A review paper on ecological portfolios
Last synced: 26 Oct 2024
https://github.com/seananderson/censored-nb2
Explorations with a censored NB2 distribution for hook competition
Last synced: 26 Oct 2024
https://github.com/seananderson/knitr-themes-demo
A demonstration of knitr themes
Last synced: 26 Oct 2024
https://github.com/seananderson/spudr
An R package for tracking and managing couch-potato investment portfolios
Last synced: 26 Oct 2024
https://github.com/seananderson/multipanel
Workshop on multipanel plotting in R with base graphics
Last synced: 26 Oct 2024
https://github.com/seananderson/csl-abbrev
Journal abbreviation files for CSL (biology, medicine, ecology, fisheries)
Last synced: 26 Oct 2024
https://github.com/seananderson/fish600
Repository for work related to the FISH600 project: by the Stock Assessment Research Team from the School of Aquatic and Fishery Sciences at The University of Washington
Last synced: 26 Oct 2024
https://github.com/seananderson/lobsters-predators
Analysis of lobster-predator-climate interactions
Last synced: 26 Oct 2024
https://github.com/seananderson/conservation_pathways
Code for multiple conservation pathways paper
Last synced: 26 Oct 2024
https://github.com/seananderson/ext-meta
Paleo marine extinction risk meta-analysis for NESCent working group
Last synced: 26 Oct 2024
https://github.com/seananderson/catchstatus
R package exploring methods of assigning fishery stock status based on catch
Last synced: 26 Oct 2024
https://github.com/seananderson/ctctools
An R package for analyses performed by the Chinook Technical Committee (CTC) of the Pacific Salmon Commission (PSC).
Last synced: 26 Oct 2024
https://github.com/seananderson/ecofoliosim
Simulate from community dynamics to explore caveats and solutions to optimizing ecological portfolios
Last synced: 26 Oct 2024
https://github.com/seananderson/plyr-statsbeerz
Presentation slides and notes
Last synced: 26 Oct 2024
https://github.com/seananderson/testbdf
Minimal example demonstrating problem building an R package using the Stan BDF ODE solver
Last synced: 26 Oct 2024
https://github.com/seananderson/pbs-flatfish-cpue
Exploring flatfish CPUE trends in the Canadian pacific region
Last synced: 26 Oct 2024
https://github.com/seananderson/solarized-knitr
Experimental Solarized colour themes for knitr
Last synced: 26 Oct 2024