Projects in Awesome Lists by tmsincomb
A curated list of projects in awesome lists by tmsincomb .
https://github.com/tmsincomb/imagetocsv
Converts an image to a CSV. This exists because Chorus 3.0 is bat-shit and only show images for vital metadata.
csv image2csv imagetocsv opencv pdftotext pytesseract python tesseract
Last synced: 17 Jan 2025
https://github.com/tmsincomb/seqpandas
Import genomic data to get a Pandas & Biopython hybrid with fancy shortcuts to make Machine Learning preprocessing easy!
Last synced: 17 Jan 2025
https://github.com/tmsincomb/cudamm
Matrix multiplication analysis with CUDA
Last synced: 06 Mar 2025
https://github.com/tmsincomb/main_work_file
General place to put what I'm working on
Last synced: 06 Mar 2025
https://github.com/tmsincomb/coffee-src
USDA's coffee import and export website skeleton.
Last synced: 06 Mar 2025
https://github.com/tmsincomb/deepvcf
Variant Calling with Deep Learning for Prokaryotic genomes using TensorFlow. Adds (0 <= P(Variant) <= 1) to VCF files under INFO as abbreviated "ACC=".
deep-learning deeplearning prokaryotes prokaryotic-genomes variant-call-format variant-calling vcf
Last synced: 06 Mar 2025
https://github.com/tmsincomb/anonymize-dicom
Wish to share your dicom files to collaborators, but you don't want to break HIPA? Well this is the tool for you! This will create a copy of a folder and strip and HIPA related meta data from the dicom files!
Last synced: 06 Mar 2025
https://github.com/tmsincomb/docxparser
Parsing docx files with python-docx and pandoc
Last synced: 06 Mar 2025
https://github.com/tmsincomb/bioportal-api
API Wrapper for BioPortal's rest API
Last synced: 06 Mar 2025
https://github.com/tmsincomb/interlex-bulk-ingestion
Ingest entities from a CSV or Google Sheet and get the same mode of input back with additional columns added to know how it went.
Last synced: 06 Mar 2025
https://github.com/tmsincomb/cs503-project
Project assignment for CS503 Scientific Databases **cough glorified mysql course** where we make a interactive mysql database using flask for the front end.
Last synced: 06 Mar 2025
https://github.com/tmsincomb/gs-tools
Google Sheet general tools using gspread
Last synced: 06 Mar 2025
https://github.com/tmsincomb/genscript
FARM stack (FastAPI, Retool, MongoDB) for the Protein Production Pipeline by connecting P4 to P3
Last synced: 06 Mar 2025
https://github.com/tmsincomb/amigo
Amigo 2 API Wrapper
amigo amigo2 api geneontology golr python
Last synced: 06 Mar 2025
https://github.com/tmsincomb/grayscale
Using PyCuda to convert RGB to GrayScale
Last synced: 06 Mar 2025
https://github.com/tmsincomb/h5ad-tutorial
Some h5ad single cell file parsing work to help with future projects
Last synced: 06 Mar 2025