Projects in Awesome Lists by warelab
A curated list of projects in awesome lists by warelab .
https://github.com/warelab/gramene-genetree-vis
React client-side vis for Compara gene tree
gramene gramene-search reactjs
Last synced: 19 Aug 2025
https://github.com/warelab/gramene-lib
Library functions for the Gramene Project
Last synced: 14 May 2025
https://github.com/warelab/sciapps
SciApps: a cloud-based platform for reproducible bioinformatics workflows
Last synced: 03 Jul 2025
https://github.com/warelab/gramene-ensembl
Gramene's Ensembl plugins, extensions, configuration.
Last synced: 12 Sep 2025
https://github.com/warelab/gramene-curation
Web application for gene curation.
Last synced: 09 Feb 2026
https://github.com/warelab/gramene-mongodb
Gramene's MongoDB. ETL code
database gramene gramene-search javascript mongodb nodejs ontologies
Last synced: 23 Apr 2025
https://github.com/warelab/gramene-site
Software for running the web frontend
Last synced: 20 Jul 2025
https://github.com/warelab/gramene-swagger
Gramene web service interface, powered by swagger
gramene gramene-search javascript nodejs swagger
Last synced: 27 Apr 2026
https://github.com/warelab/fastaidx
redis backed api that mimics ensembl rest :species/sequence/region/:location (JSON only)
Last synced: 01 Nov 2025
https://github.com/warelab/mdview
react component to view markdown files from github
Last synced: 01 Nov 2025
https://github.com/warelab/gramene-sites
Front end of gramene main and subsites
Last synced: 01 Nov 2025
https://github.com/warelab/gramene-taxonomy-with-genomes
Integrate gramene-trees-client taxonomy with gramene-bins-client
Last synced: 24 Aug 2025
https://github.com/warelab/gramene-web-tools
User interface tools to API, etc.
Last synced: 14 May 2025
https://github.com/warelab/gramene-bins-client
Provide convenient API for working with gene distribution bins provided by data.gramene.org/genes
Last synced: 14 May 2025
https://github.com/warelab/gramene-react-kbase-merge
Initial work on merging kbase widgets into gramoogle.
Last synced: 23 Jun 2025
https://github.com/warelab/nam_annotation
This repo contains the full annotation workflow used to annotate the NAM genomes
Last synced: 07 Feb 2026
https://github.com/warelab/gramene-dbxrefs
module for linking to external databases
Last synced: 17 Mar 2026
https://github.com/warelab/gramoogle
Gramene Search Interface
gramene gramene-search reactjs
Last synced: 15 Feb 2026
https://github.com/warelab/gramene-search-vis
Visualizations used in gramene-search
gramene gramene-search reactjs
Last synced: 17 Apr 2026
https://github.com/warelab/gramene-ebeye
REST endpoint to furnish the Gramene ensembl site with search results
Last synced: 29 Apr 2026
https://github.com/warelab/gramene-solr
database gramene gramene-search javascript nodejs solr
Last synced: 08 May 2026
https://github.com/warelab/sorghum-marker-dashboard
Making markers accesible with dashboard
Last synced: 10 Jun 2026
https://github.com/warelab/brapi-searcher
React component UI for querying brapi-suggest
Last synced: 01 Nov 2025
https://github.com/warelab/maizecode
Homepage for the MaizeCode project on leveraging the CyVerse infrastructure
Last synced: 23 Jan 2026
https://github.com/warelab/gramene-etl
Tools for extraction, transform, and load (ETL) of Gramene data
Last synced: 24 Jan 2026
https://github.com/warelab/gramene-gene-positions
Simple module that allows conversion between position indices in genome, gene, transcript and protein space.
Last synced: 01 Nov 2025
https://github.com/warelab/gramene-vm-conf
Gramene Virtual Machine configuration
Last synced: 01 Nov 2025
https://github.com/warelab/gramene-catalyst
The Gramene website using the Catalyst framework.
Last synced: 01 Nov 2025
https://github.com/warelab/gramene-search-client
Javascript client for searching Gramene's API
Last synced: 01 Nov 2025