Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists by zoccoler
A curated list of projects in awesome lists by zoccoler .
https://github.com/zoccoler/metroid
Computational tool to filter subcellular transmembrane potential signals from noisy single cell fluorescence videos
blind-source-separation filtering-algorithm fluorescence-microscopy-imaging membrane-potentials region-of-interest
Last synced: 03 Jan 2025
https://github.com/zoccoler/napari-metroid
This napari plugin creates several regions of interest of similar area over cells in a fluorescence video (2D+time). It then gets ROIs means over time and performs signal denoising: fixes photobleaching and separates signal from noise by means of blind source separation (with or without wavelet filtering).
Last synced: 09 Nov 2024
https://github.com/zoccoler/napari-introduction-4-image-analysis-and-data-processing-in-super-resolution-microscopy-2023
A repository containing napari introduction materials for the Image Analysis and Data Processing (not only) in Super-Resolution Microscopy 2023.
Last synced: 03 Jan 2025
https://github.com/zoccoler/deep-learning-omero-scripts
This repository hosts OMERO scripts for running some deep-learning pre-trained models for images in an OMERO server with a GPU.
Last synced: 03 Jan 2025
https://github.com/zoccoler/qm_course_bio_image_analysis_with_napari_2024
QM course lectures in Prague 2024 about bio-image analysis using napari
Last synced: 03 Jan 2025
https://github.com/zoccoler/nap-plot-tools
A NAPari PLOTter TOOLbar and tools for additional functionalities.
Last synced: 09 Nov 2024