Projects in Awesome Lists tagged with codeml
A curated list of projects in awesome lists tagged with codeml .
https://github.com/lkremer/msa_trimmer
Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.
aligned-regions alignment-trimming cds-alignment codeml codon-alignment molecular-evolution msa-trimmer multiple-sequence-alignment paml phylogenetics sequence-alignment trimmer trimming
Last synced: 06 Jul 2025
https://github.com/chenyangkang/fasta2codeml
A codeml (PAML package) wrapper to make life easier. Dummy input unaligned multi-species fasta file (a single gene), and output codeml result.
codeml ecology molecular-evolution natural-selection paml selection
Last synced: 07 Apr 2026
https://github.com/sing-group/adops
Automatic Detection of Positively Selected Sites
biooinformatics codeml fasta java java-bioinformatics mrbayes phylogenetic-trees phylogenetics positive-selection
Last synced: 03 Jul 2025
