Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists tagged with microscopy-images
A curated list of projects in awesome lists tagged with microscopy-images .
https://github.com/borda/pyimsegm
Image segmentation - general superpixel segmentation & center detection & region growing
biomedical-imaging center-detection ellipse-fitting graph-cut graph-cuts image-analysis image-annotation image-processing image-segmentation ipynb medical-imaging microscopy-images object-detection region-growing segmentation-pipeline shape-models superpixel-segmentation superpixels
Last synced: 27 Sep 2024
https://github.com/Borda/pyImSegm
Image segmentation - general superpixel segmentation & center detection & region growing
biomedical-imaging center-detection ellipse-fitting graph-cut graph-cuts image-analysis image-annotation image-processing image-segmentation ipynb medical-imaging microscopy-images object-detection region-growing segmentation-pipeline shape-models superpixel-segmentation superpixels
Last synced: 03 Aug 2024
https://github.com/computational-cell-analytics/micro-sam
Segment Anything for Microscopy
cell-segmentation microscopy-images mitochondria-segmentation napari nuclei-segmentation segment-anything segmentation
Last synced: 03 Aug 2024
https://github.com/alexander-rakhlin/ICIAR2018
Our solution for ICIAR 2018 Grand Challenge
computer-aided-diagnosis computer-vision deep-learning healthcare iciar-challenge machine-learning microscopy-images
Last synced: 03 Aug 2024
https://github.com/seung-lab/cloud-volume
Read and write Neuroglancer datasets programmatically.
big-data biomedical-image-processing chunked-image cloud connectomics electron-microscopy gcs large-image matrix mesh microscopy microscopy-images neuroglancer numpy python s3 serverless skeletons tensor volumetric-data
Last synced: 03 Aug 2024
https://github.com/Open-Science-Tools/nd2reader
Pure Python library for reading NIS Elements ND2 images and metadata
microscopy microscopy-images nd2 nikon nis-elements pims
Last synced: 03 Aug 2024
https://github.com/lens-biophotonics/ZetaStitcher
ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
fluorescence-microscopy-imaging microscopy microscopy-images stitching volumetric-images
Last synced: 03 Aug 2024
https://github.com/tlnagy/microscopylabels.jl
Easily embed annotations in your microscopy images
image-processing julia julialang microscopy microscopy-images
Last synced: 29 Sep 2024
