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Projects in Awesome Lists tagged with rpy2

A curated list of projects in awesome lists tagged with rpy2 .

https://github.com/theislab/anndata2ri

Convert between AnnData and SingleCellExperiment

bioconductor jupyter rpy2 scanpy single-cell

Last synced: 22 Dec 2024

https://github.com/jmwoloso/pychattr

Python Channel Attribution (pychattr) - A Python implementation of the excellent R ChannelAttribution library

channel-attribution data-analysis data-science machine-learning python python-channel-attribution rpy2 wrapper

Last synced: 13 Nov 2024

https://github.com/rpy2/rpy2-docker

Running rpy2 in Docker containers

docker-containers jupyterlab mybinder python r rpy2

Last synced: 10 Nov 2024

https://github.com/rpy2/rpy2-arrow

Share Apache Arrow datasets between Python and R.

apache-arrow arrow python r rpy2

Last synced: 10 Nov 2024

https://github.com/nalomran/pyreqtl

A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.

bioinformatics bioinformatics-analysis bioinformatics-tool data-science gene-expression matrixeqtl numpy pandas python python3 r rna-seq rna-seq-analysis rpy2 scipy snvs

Last synced: 11 Oct 2024

https://github.com/rpy2/rpy2-r6

rpy2 extension package to faciliate handling of R6 objects

python r r6 rpy2

Last synced: 10 Nov 2024

https://github.com/rpy2/rpy2-matrix

Mapping of the R package Matrix for rpy2

python r rpy2 sparse-matrices

Last synced: 10 Nov 2024

https://github.com/thomaszwagerman/rnpy

Documentation on using R and Python together

pip posit python quarto r renv reticulate rpy2 shiny venv

Last synced: 03 Dec 2024