https://github.com/sanjaysgk/ipg

Immunopeptidogenomics — cryptic peptide database construction from RNA-seq. An nf-core-style port of the 31-step IPG pipeline (Scull et al. Mol Cell Proteomics 2021), built for the Li and Purcell Labs at Monash University.

bioinformatics cancer-immunotherapy cancer-research cryptic-peptides gatk4 hla immunopeptidogenomics immunopeptidomics mass-spectrometry mhc monash-university mutect2 neoantigens nextflow nf-core pixi reproducible-research rnaseq star-aligner stringtie

Last synced: 18 May 2026