Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists tagged with gatk4
A curated list of projects in awesome lists tagged with gatk4 .
https://github.com/nf-core/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
annotation bioinformatics cancer conda containers gatk4 genomics germline next-generation-sequencing nextflow nf-core pipeline pre-processing reproducible-research somatic target-panels variant-calling whole-exome-sequencing whole-genome-sequencing workflow
Last synced: 07 Nov 2024
https://github.com/sydney-informatics-hub/indexreferencefasta-nf
Create required reference genome index files for WGS data analysis
bioinformatics bwa docker fasta gatk4 genome genomics index nextflow pipeline reference-genome samtools singularity workflow
Last synced: 21 Nov 2024
