https://github.com/GoekeLab/bambu-pipe

Transcript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu

bambu genomics isoform-quantification long-read-rna-seq long-read-sequencing nanopore nextflow pacbio pipeline rna-seq single-cell spatial-transcriptomics transcript-discovery transcript-quantification transcriptomics

Last synced: 11 Jun 2026