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Projects in Awesome Lists by Public-Health-Scotland

A curated list of projects in awesome lists by Public-Health-Scotland .

https://github.com/public-health-scotland/phsmethods

An R package to standardise methods used in Public Health Scotland (https://public-health-scotland.github.io/phsmethods/)

r-package

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/phstemplates

Standard R templates and project structure for Public Health Scotland (https://public-health-scotland.github.io/phstemplates/)

r-package rmarkdown rmarkdown-template rstudio template

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/hospital-acute-activity

Code to create Public Health Scotland's Hospital Acute Care Activity publication

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/github-guidance

Guidance and best practice rules for using GitHub within Public Health Scotland

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/phsstyles

Standard Graphic Styles for use in Public Health Scotland (https://public-health-scotland.github.io/phsstyles/)

r-package

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/resources

Useful resources for the software and methodologies used by the Transforming Publishing team

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/toolkit

Templates and resources for transforming publications

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/hsmr

Reproducible Analytical Pipeline of the Hospital Standardised Mortality Ratio (HSMR) quarterly publication

rap

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/r-project-structure

A template for R projects

template

Last synced: 08 Nov 2024

https://github.com/Public-Health-Scotland/r-project-structure

A template for R projects

template

Last synced: 13 Aug 2024

https://github.com/Public-Health-Scotland/resources

Useful resources for the software and methodologies used by the Transforming Publishing team

Last synced: 13 Aug 2024

https://github.com/public-health-scotland/phsopendata

Functions to extract and interact with data from the Scottish Health and Social Care Open Data platform.

r-package

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/scotpho-indicator-production

Code used to prepare data for indicators in ScotPHO's profiles

data-manipulation health-data public-health

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/learnr-online

An interactive, online introduction to R training for employees in Public Health Scotland.

training

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/covid-wider-impacts

Code for the COVID-19 wider impacts on the health care system publication

covid shiny

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/slfhelper

An R package for working with the SLFs

r r-package

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/life-expectancy

Code to generate ScotPHO life expectancy and healthy life expectancy estimates published in ScotPHO online profiles tool

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/scotpho-plotly-charts

Charts for ScotPHO's website using Plotly

charts plotly public-health

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/r-pubhealth-workshop

Presentations, code and exercises for workshop on tools for public health data

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/technical-docs

Technical documentation, including guidance and best practice for Public Health Scotland (PHS)

data-science documentation git github python r

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/python-resources

A place to share useful resources on Python. https://nbviewer.jupyter.org/github/Public-Health-Scotland/Python-Resources/blob/master/Python%20Guidance%20for%20PHI.ipynb?flush_cache=true

python

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/covid-19_respiratory_surveillance_dashboard

A Public Health Scotland R shiny app for surveillance of COVID-19 and respiratory illnesses in Scotland

app covid-19 dashboard public-health respiratory scotland shiny surveillance

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/source-linkage-files

This repo is for the syntax used for the PHS Source Linkage File project

r r-package

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/r-exercise

A short R exercise for Public Health Scotland analysts interested in creating a Reproducible Analytical Pipeline

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/knowledge-base

Web app for PHS staff to access training and guidance resources and social content related to Data Science.

data-science public-health social training web

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/open-data

Examples of how to use the API of https://www.opendata.nhs.scot/

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/rmarkdown-training-online

An interactive, online introduction to R Markdown training for employees in Public Health Scotland.

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/dementia-pds

Reproducible Analytical Pipeline (RAP) for Dementia Post-Diagnostic Support (PDS) management reports and publication.

rap

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/cocin-scotland

Analysis of Scottish data from ISARIC CoCIN dataset

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/captnd

A patient-level dataset for outpatient mental health in Scotland.

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/phsmisc

What the Package Does (One Line, Title Case)

r-package

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/ioslides-structure

A template for ioslides

template

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/posit-workbench-job-scheduler

Functions to assist with programmatically launching Workbench Jobs on the Kubernetes cluster, and scheduling these to run a specific time.

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/git-guide

A quick start guide for using Git and GitHub: https://public-health-scotland.github.io/git-guide/

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/gylecodeclub

Notes and resources for the Gyle Code Club

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/health-and-care-experience-survey-2023

This repository contains the code for analysing the 2023 health and care experience survey

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/scotpho-lookups

Preparing geography and population lookups used to produce indicator data

geography population

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/qpi-dashboard

Processing of Quality Performance Indicators data, as part of the National Cancer Quality Programme (Scotland).

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/delayed-discharges-monthly

RAP (Reproducible Analytical Pipeline) of the Delayed Discharges monthly publication

rap

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/phsverse

Easily install and load packages developed in PHS

r-package

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/end-of-life-pub

Reproducible Analytical Pipeline (RAP) for Percentage of End of Life Spent at Home or in a Community Setting Publication

rap

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/nriip-qa-checks

Starter checks for all HBs.

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/covid-vulnerability

ScotPHO COVID-19 Community Vulnerability

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/scotpho-website-updates

Code used to prepare data for ScotPHO's website

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/cancer-patient-experience-survey-2024

This repository contains the code for analysing the 2024 cancer patient experience survey

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/msg-indicators

Code for creating data for the MSG Indicators

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/cancer-routes-to-diagnosis

Emergency and Non-Emergency Routes to Cancer Diagnosis

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/nss-r-resources-app

App to host different resources on R for NSS analysts

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/package-dev-guidance-site

Repo for a small website of resource on PHS/general best practice for package development

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/ntts2019

Slides for NTTS Conference 2019

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/national-stats-template

Templates for producing National Statistics Publications using RMarkdown

template

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/ahp_dsa

AHP MSK data science accelerator

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/national-indicators

Code for production of the National Indicators

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/waiting_times_clinical_prioritisation

This repository contains the Reproducible Analytical Pipeline (RAP) to produce the quarterly statistics on clinical prioritisation, part of the Stage of Treatment (SoT) publication.

data healthcare nhs public-health scotland shiny shiny-app treatment waiting-time

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/sbss

Reproducible Analytical Pipeline of the Scottish Bowel Screening Programme Statistics (SBSS) publication

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/disclosure_control

Performs Statistical Disclosure Control (SDC) on a variety of datasets to reduce the risk of patients being identified within a dataset.

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/p1-bmi

Primary 1 Body Mass Index Publication repo

rap

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/drhs_data_trend

DRHS data trend page

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/scotpho-life-expectancy-hb

This code produces the shiny app chart in the Deaths and life expectancy > Data > NHS Boards section of the ScotPHO website.

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/hfa-tool

Scotland and Europe health for all database

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/cases

Cancer and Adult Screening Engagement and Skills repository

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/infographics-template

A template that LIST can use to help develop their own Infographics

template

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/scotpho-common-code

snippets of commonly used R code

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/mhqi-dashboard

The Mental Health Team's repo for the Mental Health Quality Indicators Dashboard

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/preterm_trends_public

Public materials related to preterm birth trends 2005-2019

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/vacc-dq-reporting

Repository for data quality reporting by the PHS Data Management Vaccines team.

Last synced: 08 Nov 2024

https://github.com/public-health-scotland/metadata-catalogue-dashboard

R Shiny dashboard to display the metadata for the health & wellbeing catalogue.

Last synced: 08 Nov 2024