Projects in Awesome Lists by npavlovikj
A curated list of projects in awesome lists by npavlovikj .
https://github.com/npavlovikj/prokevo
ProkEvo - an automated, reproducible, and scalable framework for high-throughput bacterial population genomics analyses.
bacterial-genome-analysis high-performance-computing high-throughput-computing osg pegasus-workflow-management
Last synced: 13 Apr 2025
https://github.com/npavlovikj/pegasus-trinity-test
Test Pegasus WMS run for Trinity
Last synced: 24 Mar 2025
https://github.com/npavlovikj/mlst_stringmlst_analyses
Scripts used to generate the analyses and figures in the paper "Systems-based approach for optimization of a scalable bacterial ST mapping assembly-free algorithm".
bioinformatics bioinformatics-pipeline mlst stringmlst
Last synced: 24 Mar 2025
https://github.com/npavlovikj/nano-align-merge
Scripts for merging and filtering alignments from NanoBLASTer, GraphMap and LAST
Last synced: 24 Mar 2025