Ecosyste.ms: Awesome

https://github.com/getantibody/antibody

The fastest shell plugin manager.

antibody dotfiles golang zsh

Last synced: 28 Sep 2024

https://github.com/merck/biophi

BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.

antibody humanization humanness oasis sapiens

Last synced: 21 Dec 2024

https://github.com/Merck/BioPhi

BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.

antibody humanization humanness oasis sapiens

Last synced: 16 Nov 2024

https://github.com/genentech/walk-jump

Official repository for discrete Walk-Jump Sampling (dWJS)

antibody machine-learning protein-design protein-sequences proteins

Last synced: 10 Dec 2024

https://github.com/merck/sapiens

Sapiens is a human antibody language model based on BERT.

antibody bert embeddings language-model sapiens

Last synced: 16 Nov 2024

https://github.com/Merck/Sapiens

Sapiens is a human antibody language model based on BERT.

antibody bert embeddings language-model sapiens

Last synced: 26 Sep 2024

https://github.com/frankroeder/dotfiles

$HOME of my ~/.dotfiles (macOS & Linux)

alacritty antibody arm catppuccin docker dotfiles homebrew kubectl m1 macos neovim nvim sketchybar skhdrc tmux x86 yabai zsh

Last synced: 06 Dec 2024

https://github.com/gf712/abpytools

Python package for analysis of antibody heavy and light chains

antibody antibody-numbering antibody-sequences bioinformatics python

Last synced: 07 Nov 2024

https://github.com/snijderlab/stitch

Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling

antibody mass-spectrometry sequencing

Last synced: 22 Nov 2024

https://github.com/bushidocodes/dotfiles

Dotbot managed dotfiles for a polyglot dev using WSL. Includes PowerShell stuff for Windows Installation

antibody dotfiles powershell vscode windows wsl wsl2 zsh

Last synced: 04 Dec 2024

https://github.com/adhamu/dotfiles

For macOS & Linux

antibody bash brew cask docker dotfiles linux macos npm python starship yarn

Last synced: 24 Oct 2024

https://github.com/arsham/dotfiles

My dotfiles for zsh, tmux, etc.

antibody dotfiles tmux zsh zshrc

Last synced: 27 Oct 2024

https://github.com/luismayta/zsh-servers-functions

servers functions for shell

antibody antigen zsh-functions

Last synced: 31 Oct 2024

https://github.com/jrwrigh/dotfiles2.0

My (new) dotfiles repository

antibody dotfiles neovim tmux zsh

Last synced: 12 Oct 2024

https://github.com/astrazeneca/selfpad

The official implementation of "Improving Antibody Humanness Prediction using Patent Data".

antibody antibody-design antibody-sequence attention contrastive-learning humanness immunogenicity-prediction patent-data transformer

Last synced: 18 Nov 2024

https://github.com/longpdo/dotfiles

My macOS dev setup: zsh configuration and a collection of bash scripts.

antibody bash-script dotfiles homebrew macos

Last synced: 11 Oct 2024

https://github.com/hadenlabs/zsh-git

Aliases git for shell

antibody antigen git hadenlabs peru plugins zsh

Last synced: 11 Dec 2024

https://github.com/luismayta/zsh-docker-compose-aliases

Aliases docker-compose for zsh

antibody antigen zsh zsh-plugins

Last synced: 19 Dec 2024

https://github.com/dohlee/protstruc

Protein structure handling in Python made easy.

antibody antibody-design bioinformatics bioinformatics-tool computational-biology data-handling protein protein-design protein-structure protein-structure-analysis protein-structure-generation pytorch

Last synced: 11 Nov 2024

https://github.com/dohlee/igfold-pytorch

Unofficial re-implementation of IgFold, a fast antibody structure prediction method, in PyTorch.

antibody artificial-intelligence protein protein-structure protein-structure-prediction transformer

Last synced: 11 Nov 2024

https://github.com/danielbayerlein/zsh-plugins

🔌 Plugins for Zsh

antibody antigen oh-my-zsh prezto zgen zplug zsh zsh-plugin

Last synced: 22 Nov 2024

https://github.com/dohlee/diffab-pytorch

An unofficial re-implementation of DiffAb, a diffusion-based generative model for antigen-specific antibody design and optimization.

antibody antibody-design bioinformatics computational-biology diffusion diffusion-models protein protein-structure protein-structure-generation

Last synced: 11 Nov 2024

https://github.com/dohlee/deepab-pytorch

An unofficial re-implementation of DeepAb, an interpretable deep learning model for antibody structure prediction.

antibody antibody-sequences antibody-structure-prediction bioinformatics biology computational-biology protein protein-language-model protein-structure-prediction

Last synced: 11 Nov 2024

https://github.com/matsunagalab/paper_higashida2021

antibody molecular-dynamics nanobody replica-exchange vhh

Last synced: 19 Nov 2024

https://github.com/zmactep/pymol-designer

Protein design tools as PyMOL plugin

antibody protein-design pymol-plugin

Last synced: 17 Dec 2024

https://github.com/gf712/scfv-autoencoders

Deep autoencoder with tensorflow and keras with scFv sequences

antibody autoencoder

Last synced: 02 Dec 2024