Ecosyste.ms: Awesome

An open API service indexing awesome lists of open source software.

https://github.com/genentech/equifold

Official code repository for EquiFold

machine-learning proteins structural-biology structure-prediction

Last synced: 13 Jun 2024

https://github.com/soedinglab/plass

sensitive and precise assembly of short sequencing reads

bioinformatics metagenomics metatranscriptomics opensource proteins proteomics sequence-assembler

Last synced: 13 Jun 2024

https://github.com/HannesStark/EquiBind

EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein

drug-discovery equivariance geometry graph-neural-networks molecules protein-structure proteins

Last synced: 07 Jun 2024

https://github.com/microsoft/foldingdiff

Diffusion models of protein structure; trigonometry and attention are all you need!

diffusion diffusion-models protein protein-structure-generation proteins transformer

Last synced: 01 Jun 2024

https://github.com/Acellera/moleculekit

MoleculeKit: Your favorite molecule manipulation kit

drug-discovery machine-learning molecular-modeling molecular-simulation molecule proteins

Last synced: 27 May 2024

https://github.com/virtualramblas/awesome-deep-learning-4-life-sciences

A collection of resources for Deep Learning in Python for Life Sciences (with focus on biotech and pharma).

biotech cheminformatics deeplearning drug-discovery drug-repurposing molecules pharmaceuticals proteins python

Last synced: 22 Mar 2024

https://github.com/aqlaboratory/proteinnet

Standardized data set for machine learning of protein structure

dataset deep-learning machine-learning protein-sequence protein-structure proteins

Last synced: 18 Mar 2024