Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
https://github.com/chao1224/Geom3D
Geom3D: Geometric Modeling on 3D Structures, NeurIPS 2023
3d 3d-structures ai4science biology chemistry crystals drugs equivariance geometry group invariance material molecules physics proteins symmetry
Last synced: 13 Jun 2024
![](https://github.com/chao1224.png)
https://github.com/genentech/equifold
Official code repository for EquiFold
machine-learning proteins structural-biology structure-prediction
Last synced: 13 Jun 2024
![](https://github.com/Genentech.png)
https://github.com/soedinglab/plass
sensitive and precise assembly of short sequencing reads
bioinformatics metagenomics metatranscriptomics opensource proteins proteomics sequence-assembler
Last synced: 13 Jun 2024
![](https://github.com/soedinglab.png)
https://github.com/HannesStark/EquiBind
EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
drug-discovery equivariance geometry graph-neural-networks molecules protein-structure proteins
Last synced: 07 Jun 2024
![](https://github.com/HannesStark.png)
https://github.com/octavian-ganea/equidock_public
EquiDock: geometric deep learning for fast rigid 3D protein-protein docking
deeplearning docking drug-discovery drugdiscovery equivariance equivariant-network equivariant-representations geometry graphneuralnetwork protein-protein-interaction proteins
Last synced: 07 Jun 2024
![](https://github.com/octavian-ganea.png)
https://github.com/microsoft/foldingdiff
Diffusion models of protein structure; trigonometry and attention are all you need!
diffusion diffusion-models protein protein-structure-generation proteins transformer
Last synced: 01 Jun 2024
![](https://github.com/microsoft.png)
https://github.com/Acellera/moleculekit
MoleculeKit: Your favorite molecule manipulation kit
drug-discovery machine-learning molecular-modeling molecular-simulation molecule proteins
Last synced: 27 May 2024
![](https://github.com/Acellera.png)
https://github.com/BradyAJohnston/MolecularNodes
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
biochemistry blender blender-addon geometry-nodes molecular-modeling molecule pdb protein protein-data-bank protein-structure protein-visualization proteins sciart structural-biology visualisation
Last synced: 22 Apr 2024
![](https://github.com/BradyAJohnston.png)
https://github.com/virtualramblas/awesome-deep-learning-4-life-sciences
A collection of resources for Deep Learning in Python for Life Sciences (with focus on biotech and pharma).
biotech cheminformatics deeplearning drug-discovery drug-repurposing molecules pharmaceuticals proteins python
Last synced: 22 Mar 2024
![](https://github.com/virtualramblas.png)
https://github.com/aqlaboratory/proteinnet
Standardized data set for machine learning of protein structure
dataset deep-learning machine-learning protein-sequence protein-structure proteins
Last synced: 18 Mar 2024
![](https://github.com/aqlaboratory.png)