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Projects in Awesome Lists tagged with fungalgenomics
A curated list of projects in awesome lists tagged with fungalgenomics .
https://github.com/gauravcodepro/langchain-candida-literature-miner
candida literature bert machine learning. works on any literature term from pubmed.
fungal-genomes fungalgenomics machinelearning natural-language-generation natural-language-processing pubmed pubmed-abstracts pubmed-records
Last synced: 09 Nov 2024
https://github.com/gauravcodepro/fungal-its-coverage-calculator
I coded this function to estimate the fraction of the ITS predictions from the fungal metagenomics and it estimates by taking into account the sequence length and also the ITS1 and ITS2 start and stop coordinates. Provided a keyworded argument, it estimates the coverage accordingly
bioinformatics fungal-genomes fungal-its fungal-metagenomics fungalgenomics metagenomics metagenomics-data
Last synced: 09 Nov 2024
https://github.com/gauravcodepro/bacterial-site-checker
A faster implementation of the string search for the check of the insertion elements and the CRISPR sites if present in the genome string and then clip those insertion sites and get a clean genome.
bacterial-genomes bioinformatics fungalgenomics insertionelement sitesplicer
Last synced: 09 Nov 2024