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Projects in Awesome Lists tagged with metagenomics-data

A curated list of projects in awesome lists tagged with metagenomics-data .

https://github.com/gauravcodepro/pangenomes-metagenomes

a workflow for complete analysis of bacterial metagenomes and pagenome graphs and direct viewing in panchae. It will also analyze metagenomes from both illumina and long reads

bacterial-genomes bioinformatics metagenomes metagenomics-data pangenomics pangraphs

Last synced: 09 Nov 2024

https://github.com/gauravcodepro/metagenomics-abundance-normalize

a metagenomics abundance normalizer which will take the abundance OTUs file and gives you a normalized ratio for plotting of the species

bioinformatics metagenomics metagenomics-data otu-table species-distribution-modelling

Last synced: 09 Nov 2024

https://github.com/gauravcodepro/fungal-its-coverage-calculator

I coded this function to estimate the fraction of the ITS predictions from the fungal metagenomics and it estimates by taking into account the sequence length and also the ITS1 and ITS2 start and stop coordinates. Provided a keyworded argument, it estimates the coverage accordingly

bioinformatics fungal-genomes fungal-its fungal-metagenomics fungalgenomics metagenomics metagenomics-data

Last synced: 09 Nov 2024

https://github.com/seandavi/cmgd_web

Web portal and API for the Curated Metagenomics Data project

alembic api bioinformatics cloud fastapi genomics metagenomics metagenomics-data openapi openapi3 postgresql python webapp

Last synced: 05 Nov 2024