Projects in Awesome Lists tagged with polyploid
A curated list of projects in awesome lists tagged with polyploid .
https://github.com/edgardomortiz/vcf2phylip
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
alignment binary convert-snps diploid fasta haploid nexus outgroup phylip phylip-matrix phylogenetic-analysis phylogenetics polyploid snapp snps vcf vcf-files vcf-format
Last synced: 28 Feb 2026
https://github.com/tanghaibao/allhic
Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
contigs genetic-algorithm genome-assembly genome-scaffolding genomics golang heterozygous hi-c inter-contig-links lachesis pipeline polyploid
Last synced: 09 Apr 2025
https://github.com/mmollina/mappoly
Genetic maps in autopolyploids
polyploid polyploid-genetic-mapping polyploidy
Last synced: 21 Feb 2026
https://github.com/dombennett/project-cluster
:hibiscus: Short pipeline for counting number of clusters across .sam files
cdhit clustering pipeline polyploid
Last synced: 04 Jul 2025
https://github.com/pblischak/fluidigm2purc
Automated processing and haplotype inference for double-barcoded PCR amplicons
fluidigm high-throughput-sequencing phylogenomics polyploid
Last synced: 15 May 2025
https://github.com/k8hertweck/callisia
Preliminary mapping and SDM
historical-data polyploid r species-distribution-modelling
Last synced: 02 Sep 2025
