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Projects in Awesome Lists by k8hertweck

A curated list of projects in awesome lists by k8hertweck .

https://github.com/k8hertweck/carpentriescribsheets

instructor notes from Software Carpentry workshops

data-carpentry software-carpentry teaching

Last synced: 14 Nov 2024

https://github.com/k8hertweck/professional_assets_data_science

workshop on professional assets in data science careers

Last synced: 14 Nov 2024

https://github.com/k8hertweck/mt_genome_viz

visualization of the human mitochondrial genome

mitochondria mt-genome visualization

Last synced: 14 Nov 2024

https://github.com/k8hertweck/fieldlabcomparison

microbiome analysis of ant colonies

microbiome-analysis mothur otu-table r silva

Last synced: 14 Nov 2024

https://github.com/k8hertweck/cancer_genomics

Example workflow for cancer genomics analysis using TCGA data

cancer genomics tcgabiolinks transcriptomics

Last synced: 14 Nov 2024

https://github.com/k8hertweck/cancer-expression

analysis of gene expression for prostate cancer

Last synced: 14 Nov 2024

https://github.com/k8hertweck/2017-08-07-lbnl

Data Carpentry genomics workshop at LBNL

data-carpentry teaching workshop-website

Last synced: 14 Nov 2024

https://github.com/k8hertweck/tacctutorials

plain-language description of using TACC

etiquette stampede tacc teaching

Last synced: 14 Nov 2024

https://github.com/k8hertweck/ycs

sugarcane transcriptome

slurm sugarcane transcriptome trinity

Last synced: 14 Nov 2024

https://github.com/k8hertweck/hertwecklabsops

Standard operating procedures for generic phylogenetics methods.

teaching

Last synced: 14 Nov 2024

https://github.com/k8hertweck/bacterialgenomics

example genomics workflow for student training

bacteria genome-assembly genomics variant-calling

Last synced: 14 Nov 2024

https://github.com/k8hertweck/uttylerworkshops

Short, small-scale workshops for groups at University of Texas at Tyler

Last synced: 14 Nov 2024

https://github.com/k8hertweck/tcgahelpers

analysis with TCGA expression data

Last synced: 14 Nov 2024

https://github.com/k8hertweck/asparagalestescripts

brute force approach to TE characterization in non-model systems

Last synced: 14 Nov 2024

https://github.com/k8hertweck/repipe

characterization of TEs from low-coverage genomic sequence data

transposable-elements

Last synced: 14 Nov 2024

https://github.com/k8hertweck/breastcancerntm

analysis of breast cancer gene variants

Last synced: 14 Nov 2024

https://github.com/k8hertweck/hnscctargetgenes

visualization of somatic mutations in cancer

cancer data-visualization genome

Last synced: 14 Nov 2024

https://github.com/k8hertweck/forkme

A group of simple scripts and documents to practice forking.

Last synced: 14 Nov 2024

https://github.com/k8hertweck/class-survey

generic code to assess class survey data obtained using Google Forms

education likert-data

Last synced: 14 Nov 2024

https://github.com/k8hertweck/flypopgenomics

transposon and LD analysis for replicated experimental evolution fruit fly populations

drosophila genomics ldx popoolation transposable-elements

Last synced: 14 Nov 2024

https://github.com/k8hertweck/2018-05-01-noble

website for Noble DC workshop

Last synced: 14 Nov 2024

https://github.com/k8hertweck/2015-11-19-umiami-r

Website and materials for fall 2015 U Miami workshop in R

Last synced: 14 Nov 2024

https://github.com/k8hertweck/blattabacteria

Analyzing a set of genes using phylogenetics and tests for selection

bacteria hyphy

Last synced: 14 Nov 2024

https://github.com/k8hertweck/tidytuesdaydataviz

data viz for TidyTuesday lunch meetup at the Hutch

data-visualization tidytuesday

Last synced: 14 Nov 2024

https://github.com/k8hertweck/2019-05-30-ttt-online-pdt

website for online instructor training on May 30 2019

Last synced: 14 Nov 2024

https://github.com/k8hertweck/blog

Kate's website and blog

Last synced: 14 Nov 2024