Projects in Awesome Lists tagged with reactome
A curated list of projects in awesome lists tagged with reactome .
https://github.com/dvklopfenstein/reactomepy
Explore biomolecular pathways in Reactome from the command-line or a Python script
bioinformatics bioinformatics-analysis bioinformatics-pipeline bioinformatics-scripts bioinformatics-tool biological-networks biotech biotechnology molecular-biology pathway-analysis pathway-enrichment-analysis pathway-models protein-protein-interaction reactome reactome-pathway
Last synced: 19 Oct 2025
https://github.com/moosa-r/rbioapi
rbioapi: User-Friendly R Interface to Biologic Web Services' API
api-client bioinformatics biology cran enrichment enrichment-analysis enrichr jaspar mieaa over-representation-analysis panther r reactome rstats rstats-package string uniprot
Last synced: 12 May 2025
https://github.com/linas/biome-distribution
Research into statistical distributions of genomes, proteomes and reactomes
genomic-data-analysis genomics-visualization proteogenomics proteomics reactome reactome-pathway
Last synced: 03 Jan 2026
https://github.com/bio2bel/reactome
Integration of pathway-related information from Reactome in BEL
biological-expression-language networks-biology pathways reactome system-biology
Last synced: 29 Jan 2026
https://github.com/dhimmel/pathways
A compilation of pathway gene sets
genes hetionet human pathway-commons pathway-interaction-database pathways reactome rephetio tsv wikipathways
Last synced: 23 Mar 2025
https://github.com/marinoandrea/stargate-x
Python implementation of a bipartite directed multigraph extracted from the Reactome biological pathway database.
biology bipartite graph pathway pathways reactome reactome-database reactome-graph
Last synced: 17 Mar 2025
https://github.com/caleydo/pathfinder_graph_reactome
pathfinder http://reactome.org/ graph binding
pathfinder phovea phovea-server-plugin reactome
Last synced: 19 Jan 2026
https://github.com/kkmann/pwcuratr
Curate gene pathway clusters using functional interactions
Last synced: 03 Apr 2025
https://github.com/riyavsinha/reactome-anywidget
An AnyWidget component for interactive embedding of Reactome Pathway browsers
anywidget bioinformatics reactome
Last synced: 12 Sep 2025
