Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
https://github.com/theislab/cellrank
CellRank: dynamics from multi-view single-cell data
bioinformatics cell-fate-determination cell-fate-transitions data-science fuzzy-clustering-analyses genetics machine-learning manifold-learning markov-chains rna-velocity single-cell-genomics single-cell-rna-seq trajectory-generation
Last synced: 22 Jun 2024
https://github.com/aristoteleo/dynamo-release
Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses
cell-fate differential-geometry dynamical-systems dynamo nasc-seq potential-landscape rna-acceleration rna-curvature rna-divergence rna-jacobian rna-velocity sci-fate scnt-seq scrna-seq scslam-seq vector-field
Last synced: 16 Jun 2024
https://github.com/pinellolab/pyrovelocity
𝒫robabilistic modeling of RNA velocity ⬱
cell-fate-determination deep-generative-model developmental-trajectories multiomics probabilistic-models probabilistic-programming pyro rna-splicing rna-splicing-analysis rna-velocity rna-velocity-estimation single-cell-genomics single-cell-multiomics single-cell-rna-seq transcriptomics
Last synced: 09 May 2024
