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Projects in Awesome Lists tagged with single-cell-transcriptomics

A curated list of projects in awesome lists tagged with single-cell-transcriptomics .

https://github.com/ChanghanGitHub/exFINDER

Identifying external communication signals using single-cell transcriptomics data

cell-cell-communication external-signals single-cell-transcriptomics

Last synced: 12 Nov 2024

https://github.com/earmingol/sccellfie

scCellFie, inspired by the MATLAB-based CellFie tool, offers advanced analysis of metabolic functions on Python using single-cell and spatial transcriptomics. Efficient and user-friendly, it integrates with Scanpy to extend CellFie's capabilities, enabling in-depth single-cell and spatial metabolic task analysis.

metabolic-modeling metabolic-pathways metabolism single-cell single-cell-transcriptomics spatial-transcriptomics systems-biology

Last synced: 14 Oct 2024

https://github.com/royfrancis/seqhub

Guide and links related to bulk and single-cell RNA-Seq experiments.

rna-seq rnaseq-analysis single-cell-omics single-cell-rna-seq single-cell-transcriptomics

Last synced: 17 Dec 2024