Projects in Awesome Lists tagged with metabolic-pathways
A curated list of projects in awesome lists tagged with metabolic-pathways .
https://github.com/metexplore/dexom
Diversity-based enumeration of optimal context-specific metabolic networks
cobra-toolbox constraint-based-modeling metabolic-engineering metabolic-network metabolic-pathways metabolic-reconstruction metabolism omics-data-integration optimization
Last synced: 31 Jan 2025
https://github.com/earmingol/sccellfie
scCellFie offers advanced analysis of metabolic functions from single-cell and spatial transcriptomics. Efficient and user-friendly, it runs on Python and integrates with Scanpy, enabling single-cell and spatial analysis of metabolic tasks.
metabolic-modeling metabolic-pathways metabolism single-cell single-cell-transcriptomics spatial-transcriptomics systems-biology
Last synced: 13 Apr 2025
https://github.com/sciencegenome/bigg-slint-interface
a BIGG slint interface which will give you all the information associated with the metabolic model
biggdatabase bioinformatics genome-analysis genome-annotation metabolic-models metabolic-pathways
Last synced: 18 Mar 2025
https://github.com/applicativesystem/metabolic-json
a metabolic json parser and streamlit for BIGG database
bioinformatics genome-analysis genome-bioinformatics genome-informatics json json-api json-data metabolic-models metabolic-pathways metabolic-reconstruction
Last synced: 16 Dec 2024
https://github.com/applicativesystem/bigg-slint-interface
a BIGG slint interface which will give you all the information associated with the metabolic model
biggdatabase bioinformatics genome-analysis genome-annotation metabolic-models metabolic-pathways
Last synced: 16 Dec 2024
https://github.com/gauravcodepro/streamlit-metabolic-json-modelling
streamlit application for metabolic json from BIGG modelling database.
metabolic-models metabolic-pathways metabolic-reconstruction streamlit-application streamlit-webapp
Last synced: 22 Feb 2025
https://github.com/gauravcodepro/bigg-slint-interface
a slint interface to the BIGG modeler database establishing all the links to the metanextx
genome-analysis genome-annotation metabolic-pathways slint slint-ui
Last synced: 22 Feb 2025
https://github.com/ibchgenomic/metabolic-json
a metabolic json parser and streamlit for BIGG database
bioinformatics genome-analysis genome-bioinformatics genome-informatics json json-api json-data metabolic-models metabolic-pathways metabolic-reconstruction
Last synced: 18 Mar 2025
https://github.com/ibchgenomic/bigg-slint-interface
a BIGG slint interface which will give you all the information associated with the metabolic model
biggdatabase bioinformatics genome-analysis genome-annotation metabolic-models metabolic-pathways
Last synced: 30 Mar 2025