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Projects in Awesome Lists tagged with metabolic-models

A curated list of projects in awesome lists tagged with metabolic-models .

https://github.com/carrascomj/mmodes

MMODES (Metabolic Models based Ordinary Differential Equations Simulation)

bioinformatics metabolic-models modelling python3 systems-biology

Last synced: 05 Nov 2024

https://github.com/earmingol/cobra_utils

Utility to simplify obtaining information from genome-scale models as well as their manipulation. This implementation is available only for working with COBRApy.

biochemistry bioinformatics cobra cobrapy computational-biology metabolic-models metabolic-network metabolic-reconstruction modeling modeling-tool python systems-biology

Last synced: 14 Oct 2024

https://github.com/nyxflower/memo

Constraint-based metabolic modelling with sparse IPOPT

constraint-based-modeling interior-point-optimizer metabolic-models non-linear-optimization

Last synced: 11 Oct 2024

https://github.com/robaina/marinegems

A repository of reference genome-scale metabolic models of marine microbes

marine-biology metabolic-models microbial-communities microbial-ecology systems-biology

Last synced: 04 Nov 2024