Projects in Awesome Lists tagged with spatiallibd
A curated list of projects in awesome lists tagged with spatiallibd .
https://github.com/lieberinstitute/spatiallibd
Code for the spatialLIBD R/Bioconductor package and shiny app
10xgenomics bioconductor golem rstats shiny spatial-transcriptomics spatialexperiment spatiallibd visium
Last synced: 05 Apr 2025
https://github.com/lcolladotor/cshl_rstats_genome_scale_2023
CSHL Statistical Analysis of Genome Scale Data 2023
bioconductor cshl recount3 rstats spatiallibd
Last synced: 08 Apr 2025
https://github.com/lcolladotor/cshl_rstats_genome_scale_2024
CSHL Statistical Analysis of Genome Scale Data 2024
bioconductor cshl recount3 rstats spatiallibd
Last synced: 07 Apr 2025
https://github.com/lcolladotor/rnaseq_lcg-unam_2024
Introductory RNA-seq course for LCG-UNAM Feb 2024 (in Spanish)
bioconductor isee recount3 rna-seq rstats spatiallibd summarizedexperiment
Last synced: 14 May 2025
https://github.com/lcolladotor/rnaseq_lcg-unam_2021
Introductory RNA-seq course for LCG-UNAM Feb 2021 (in Spanish)
bioconductor isee recount3 rstats spatiallibd summarizedexperiment
Last synced: 14 May 2025
https://github.com/lcolladotor/rnaseq_lcg-unam_2022
Introductory RNA-seq course for LCG-UNAM Feb 2022 (in Spanish)
bioconductor isee recount3 rna-seq rstats spatiallibd summarizedexperiment
Last synced: 14 May 2025
https://github.com/lieberinstitute/visiumstitched_brain
Example human brain data used for https://research.libd.org/visiumStitched/.
bioconductor rstats spatial spatiallibd transcriptomics visium visiumstitched
Last synced: 23 Mar 2025
https://github.com/lcolladotor/rnaseq_lcg-unam_2023
Introductory RNA-seq course for LCG-UNAM Feb 2023 (in Spanish)
bioconductor isee recount3 rna-seq rstats spatiallibd summarizedexperiment
Last synced: 14 May 2025
https://github.com/lcolladotor/rnaseq_lcg-unam_2025
Introductory RNA-seq course for LCG-UNAM Jan 2025 (in Spanish)
bioconductor isee recount3 rna-seq rstats spatiallibd summarizedexperiment
Last synced: 26 Mar 2025
https://github.com/lieberinstitute/visiumstitched
R package containing functions useful for stitching Visium capture areas. Related to https://github.com/LieberInstitute/LS_visiumStitched
10xgenomics bioconductor rstats spatial-transcriptomics spatialexperiment spatiallibd visium
Last synced: 23 Mar 2025