Projects in Awesome Lists by ACastanza
A curated list of projects in awesome lists by ACastanza .
https://github.com/acastanza/pvpalerts
Patching Miat's PvP Alerts for ESO to Keep Compatibility
Last synced: 24 Apr 2025
https://github.com/acastanza/salmon.alevin.quant
Salmon Alevin (single cell) quantification wrapper module for GenePattern.
Last synced: 24 Apr 2025
https://github.com/acastanza/seqformat
RNA-seq Preprocessing for GSEA
gsea msigdb rna-seq rna-seq-analysis rna-seq-pipeline
Last synced: 24 Apr 2025
https://github.com/acastanza/provisionsteamformation
ProvisionsTeamFormation with my personal adjustments
Last synced: 24 Apr 2025
https://github.com/acastanza/miats_cc_tracker_patched
Updated Version of Miat's CC Tracker
Last synced: 24 Apr 2025
https://github.com/acastanza/plaguecontainment
Code for an ESO Plaguebreak Purge Blocker
Last synced: 24 Apr 2025
https://github.com/acastanza/velocyto_preprocessbam
Wrapper script for preprocessing BAM files for analysis with velocyto in GenePattern
Last synced: 24 Apr 2025
https://github.com/acastanza/tximport.deseq2
tximport.DESeq2 wrapper module for GenePattern.
Last synced: 24 Apr 2025
https://github.com/acastanza/scvelo.computevelocity
scVelo wrapper module for GenePattern
Last synced: 24 Apr 2025
https://github.com/acastanza/scanpyqc
Genepattern wrapper module for ScanpyQC
Last synced: 24 Apr 2025
https://github.com/acastanza/roc.predict
Phenotype prediction using ssGSEA_ROC results
Last synced: 24 Apr 2025
https://github.com/acastanza/rseqc.infer_experiment
RSeQC.infer_experiment wrappers for GenePattern.
Last synced: 24 Apr 2025
https://github.com/acastanza/join.files
Simple file joiner for GenePattern.
Last synced: 24 Apr 2025
https://github.com/acastanza/convert.10xbam.to.fastq
10x bamtofastq wrapper module for GenePattern
Last synced: 24 Apr 2025
https://github.com/acastanza/gsea_r_old
Revisions to the GSEA-P R Application (Subramanian and Tamayo et al 2005)
bioinformatics gsea microarray rna-seq
Last synced: 24 Apr 2025
https://github.com/acastanza/deseq2.normalize
Wrapper for DESeq2 based normalization-only module.
Last synced: 24 Apr 2025
https://github.com/acastanza/preprocessvelocitytranscriptome
Transcriptome preprocessing for RNA Velocity wrapper module for GenePattern.
Last synced: 24 Apr 2025
https://github.com/acastanza/convert.alevin
Convert alevin wrapper module for GenePattern.
Last synced: 24 Apr 2025
https://github.com/acastanza/cellrank.fatemap
CellRank wrapper module for GenePattern
Last synced: 24 Apr 2025
https://github.com/acastanza/actionbarskillstyles
Enable Skill Style Overrides for Action Bar Icons
Last synced: 24 Apr 2025
https://github.com/acastanza/10x.results.to.velocity.loom
Wrapper script for a GenePattern module to create a velocity compatible loom file from single cell bam files
Last synced: 24 Apr 2025
https://github.com/acastanza/combatmetronomeupdated
Bugfixes for Combat Metronome (GCD Tracker) Update by barny
Last synced: 24 Apr 2025