Projects in Awesome Lists by ContextLab

Short undergraduate course taught at University of Pennsylvania on computational and theoretical neuroscience. Provides an introduction to programming in MATLAB, single-neuron models, ion channel models, basic neural networks, and neural decoding.

computational-neuroscience course-materials data-analysis matlab modeling neuron problem-set simulation

Last synced: 26 Nov 2024

https://github.com/contextlab/computational-neuroscience

Short undergraduate course taught at University of Pennsylvania on computational and theoretical neuroscience. Provides an introduction to programming in MATLAB, single-neuron models, ion channel models, basic neural networks, and neural decoding.

computational-neuroscience course-materials data-analysis matlab modeling neuron problem-set simulation

Last synced: 09 Apr 2025

https://github.com/contextlab/timecorr

Estimate dynamic high-order correlations in multivariate timeseries data

dimensionality-reduction graph-theory multivariate-analysis network-dynamics timeseries

Last synced: 09 Apr 2025

https://github.com/contextlab/davos

Import packages in Python, even if they aren't installed!

environment-management google-colab import install ipython jupyter package-management pip python reproducibility

Last synced: 09 Apr 2025

https://github.com/contextlab/supereeg

Infer activity throughout the brain from a small(ish) number of electrodes using Gaussian process regression

Last synced: 09 Apr 2025

https://github.com/contextlab/sherlock-topic-model-paper

Data and code for the paper "Geometric models reveal behavioural and neural signatures of transforming naturalistic experiences into episodic memories" by Andrew C. Heusser, Paxton C. Fitzpatrick, and Jeremy R. Manning

docker episodic-memories neural-signatures notebooks paper-implementations

Last synced: 09 Apr 2025

https://github.com/contextlab/experimental-psychology

Course materials for PSYC 11: Laboratory in Psychological Science, Dartmouth College (Instructor: Jeremy Manning)

education experimental-psychology laboratory-exercises open-course

Last synced: 09 Apr 2025

https://github.com/contextlab/quail

A python toolbox for analyzing and plotting free recall data

memory psychology-experiments python-toolbox speech-to-text

Last synced: 09 Apr 2025

https://github.com/contextlab/chatify

Add ipython magic commands to Jupyter notebooks that provide LLM-driven enhancements

automated-tutor chatgpt jupyter-notebook llm python

Last synced: 17 Mar 2025

https://github.com/contextlab/abstract2paper

Auto-generate an entire paper from a prompt or abstract using NLP

auto-text gpt-neo nlp notebook-jupyter text-generation

Last synced: 09 Apr 2025

https://github.com/contextlab/lab-manual

Lab manual for the Contextual Dynamics Laboratory at Dartmouth College

lab-management manual rights-and-responsibilities science-research training-materials

Last synced: 17 Feb 2025

https://github.com/contextlab/cdl-tutorials

Repo containing useful tutorials on different topics, methods, software tools, and packages used by the CDL

bayesian-methods package-creation python scientific-computing training-materials tutorial

Last synced: 09 Apr 2025

https://github.com/contextlab/attention-memory-task

An experiment used to explore interactions between covert attention and recognition memory

attention experiment memory psychology-experiments psychopy

Last synced: 09 Apr 2025

https://github.com/contextlab/timecorr-paper

Paper and code for High-level cognition during story listening is reflected in high-order dynamic correlations in neural activity patterns

cognitive-neuroscience comprehension network-dynamics story-listening timeser

Last synced: 09 Apr 2025

https://github.com/contextlab/brainfit-paper

Paper, code, and data related to the paper "Fitness tracking reveals task-specific associations between memory, mental health, and exercise" by Jeremy R. Manning, Gina M. Notaro, Esme Chen, and Paxton C. Fitzpatrick

cognitive-psychology fitness mental-health paper

Last synced: 09 Apr 2025

https://github.com/contextlab/data-wrangler

Wrangle messy numerical, image, and text data into consistent well-organized formats

data data-analysis data-science data-wrangling hugging-face image-data machine-learning nlp numpy pandas python scikit-learn

Last synced: 10 Apr 2025

https://github.com/contextlab/brain-plots

Quickly and easily create 2d and 3d plots of fMRI data (using MATLAB).

Last synced: 17 Feb 2025

https://github.com/contextlab/dartmouth-openbci-hackathon

Open BCI demo

Last synced: 17 Feb 2025

https://github.com/contextlab/autofr

Template for a free recall experiment with automatic audio transcription

Last synced: 09 Apr 2025

https://github.com/contextlab/cdl-bibliography

Bibtex file shared by the Contextual Dynamics Lab at Dartmouth College

bibliography bibtex latex

Last synced: 09 Apr 2025

https://github.com/contextlab/supereeg_paper

paper analyses

Last synced: 09 Apr 2025

https://github.com/contextlab/efficient-learning-khan

Experiment, data, and analysis code for "Text embedding models yield high-resolution insights into conceptual knowledge from short multiple-choice quizzes" by Paxton C. Fitzpatrick, Andrew C. Heusser, and Jeremy R. Manning

docker jupyter-notebook open-data paper-implementations psiturk psychology