Projects in Awesome Lists by cafferychen777
A curated list of projects in awesome lists by cafferychen777 .
https://github.com/cafferychen777/ggpicrust2
Make Picrust2 Output Analysis and Visualization Easier
16s-rrna functional-data metagenomic-analysis metagenomics microbiome microbiota picrust2 tax4fun2 visualization
Last synced: 16 Apr 2025
https://github.com/cafferychen777/microbiomestat
Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat
16s-rrna amplicon-sequencing dada2 longitudinal-data metagenomes metagenomic-analysis microbiome microbiome-analysis microbiome-data microbiome-workflow omics omics-data-integration phyloseq qiime2 statistics visualization
Last synced: 16 Apr 2025
https://github.com/cafferychen777/mLLMCelltype
An iterative multi-LLM consensus framework for accurate cell type annotation in single-cell RNA-seq data
bioinformatics cell-type-annotation consensus-algorithm large-language-models llm scanpy seurat single-cell
Last synced: 24 Apr 2025
https://github.com/cafferychen777/microbiomestat-turtorial-professional-version
MicrobiomeStat Tutorial Repository: This is a comprehensive resource for learning how to use the MicrobiomeStat package. It provides a step-by-step guide to effectively analyze complex microbiome data.
16s 16s-rrna 16s-seq analysis data-analysis metagenomes metagenomic-analysis metagenomic-pipeline metagenomics microbiome microbiome-analysis microbiome-analysis-pipelines microbiome-data microbiome-workflow omics omics-data omics-data-analysis omics-data-integration visualization
Last synced: 16 Mar 2025
https://github.com/cafferychen777/microbiomestat-shiny
A Shiny interface for the MicrobiomeStat R package, designed to facilitate analysis and visualization of microbiome data.
longitudinal-data microbiome microbiome-analysis microbiome-data microbiome-workflow
Last synced: 16 Mar 2025
https://github.com/cafferychen777/microbiomestat-turtorial-beginner-version
I've transitioned from the beginner's tutorial to a comprehensive, professional-level tutorial for the MicrobiomeStat package.
Last synced: 16 Mar 2025
https://github.com/cafferychen777/llmcal
🤖 AI-powered PopClip extension that converts natural language text into calendar events. Simply select text and create events with smart detection of time, location, meeting links, and reminders. Powered by Claude AI.
ai-tools automation-tools calendar-events calendar-management claude-ai macos-app meeting-scheduler natural-language-processing popclip-extensions time-management
Last synced: 05 Mar 2025
https://github.com/cafferychen777/-smuer-biostat-note
本指南由20生统教班杨晨在2022.03.29于德风阅览室完成，本人才疏学浅见识短浅，欢迎大家斧正，如果您是学生，请整理论据和论点发送完整文件到邮箱[email protected]，如果您是老师，可以发短信13020952531与我沟通，谢谢
Last synced: 16 Mar 2025
https://github.com/cafferychen777/caffery-research-homepage
I am a junior in Southern Medical University majoring in biostatistics. I got 2020-2021 National Scholarship from Ministry of Education of China. Only 0.2 percent of China's top students receive this honor each year. I am very good at mathematical modeling and have won a lot of awards in many national competitions. And in my freshman year, I work
academic-website cafferyyang homepage homepage-resume
Last synced: 16 Mar 2025
https://github.com/cafferychen777/llmscout
An LLM-powered tool for discovering and analyzing research papers
Last synced: 16 Mar 2025
https://github.com/cafferychen777/microbiomedaacomp
A comprehensive R toolkit for comparing and evaluating Differential Abundance Analysis (DAA) methods in microbiome studies.
Last synced: 16 Mar 2025