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Projects in Awesome Lists by ecell

A curated list of projects in awesome lists by ecell .

https://github.com/ecell/ecell4_base

An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena

c-plus-plus jupyter-notebook python simulation systems-biology

Last synced: 17 Dec 2024

https://github.com/ecell/ecell4

An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena

Last synced: 07 Nov 2024

https://github.com/ecell/ecell3

Last synced: 07 Nov 2024

https://github.com/ecell/scopyon

:microscope: Monte Carlo simulation toolkit for bioimaging systems

bioimaging-systems optics python simulation

Last synced: 07 Nov 2024

https://github.com/ecell/transomics2cytoscape

Get and integrate the pathways to create a 3D transomics network visualization

Last synced: 07 Nov 2024

https://github.com/ecell/spatiocyte

Last synced: 07 Nov 2024

https://github.com/ecell/ecell_dive

Last synced: 07 Nov 2024

https://github.com/ecell/ecell_engine

Real-time simulation engine for biological systems

Last synced: 07 Nov 2024

https://github.com/ecell/ecell4_docs

The Sphinx source for https://ecell4.e-cell.org/

jupyter-notebook python systems-biology

Last synced: 07 Nov 2024

https://github.com/ecell/ecell-build

Last synced: 07 Nov 2024

https://github.com/ecell/pd_visualizer

Last synced: 07 Nov 2024

https://github.com/ecell/moleculizer

Last synced: 07 Nov 2024

https://github.com/ecell/ode

Last synced: 07 Nov 2024

https://github.com/ecell/lbcs-sphinx

Last synced: 07 Nov 2024

https://github.com/ecell/newio

Last synced: 07 Nov 2024

https://github.com/ecell/dash-pathway

A Dash component for pathway visualization

Last synced: 07 Nov 2024

https://github.com/ecell/epdp

Last synced: 07 Nov 2024

https://github.com/ecell/sprint2016

A repository for E-Cell sprint 2016

Last synced: 07 Nov 2024

https://github.com/ecell/webbs

Last synced: 07 Nov 2024

https://github.com/ecell/hdf5data

Last synced: 07 Nov 2024

https://github.com/ecell/ecell4-garuda

E-Cell4 widget for GARUDA

Last synced: 07 Nov 2024

https://github.com/ecell/docker4azure

Last synced: 07 Nov 2024

https://github.com/ecell/ecell3-ide

Last synced: 07 Nov 2024

https://github.com/ecell/ecell3-docs

Last synced: 07 Nov 2024

https://github.com/ecell/ecell4-ode

Last synced: 07 Nov 2024

https://github.com/ecell/ecell_hugo

Last synced: 07 Nov 2024

https://github.com/ecell/ecell3-python2cpp

Python to C++ model translator for E-Cell 3

Last synced: 07 Nov 2024

https://github.com/ecell/id2id

Last synced: 07 Nov 2024

https://github.com/ecell/manylinux-dockerimage

Base Docker image for building ecell4_base manylinux wheel

Last synced: 07 Nov 2024

https://github.com/ecell/ecell-deb

Last synced: 07 Nov 2024

https://github.com/ecell/ecell4-bd

Last synced: 07 Nov 2024

https://github.com/ecell/blog

The Hugo source for https://blog.e-cell.org

Last synced: 07 Nov 2024

https://github.com/ecell/ecell4_hugo

Last synced: 07 Nov 2024

https://github.com/ecell/ecell-website

The Sphinx source for https://www.e-cell.org/

Last synced: 07 Nov 2024

https://github.com/ecell/microscope

Last synced: 07 Nov 2024

https://github.com/ecell/blenderviz

Last synced: 07 Nov 2024

https://github.com/ecell/ecell4-vis

frontend for ecell4

Last synced: 07 Nov 2024

https://github.com/ecell/phonyem

Last synced: 07 Nov 2024

https://github.com/ecell/ecell4-docker

Last synced: 07 Nov 2024

https://github.com/ecell/ecell3-docker

Last synced: 07 Nov 2024

https://github.com/ecell/kosmogora

Last synced: 07 Nov 2024

https://github.com/ecell/ecell4-cme

Last synced: 07 Nov 2024

https://github.com/ecell/transomics2cytoscape-py

Automation of the transomics 2.5D network visualization

Last synced: 07 Nov 2024