https://github.com/raw-lab/MetaCerberus

Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focus of shotgun metaomics data

Last synced: 23 Mar 2025

https://github.com/raw-lab/mercat2

MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data

dask database-independent-analysis diversity diversity-estimation divideandconquer fastq k-mer-counting k-mer-frequency kmer-frequency-count metagenomic-analysis metatranscriptomic-analysis multiomics multiomics-data nucleotides plotly protein python

Last synced: 17 Jan 2026

https://github.com/raw-lab/metaome_stats

Statistical package for metaome denovo assembly results.

fasta genome metagenome metagenome-assembly metaome-stats metatranscriptomics transcriptomics

Last synced: 16 Jan 2026

https://github.com/raw-lab/rustybin

A domain-aware metagenomic binner for bacteria, archaea, and viruses.

Last synced: 07 Jun 2026