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Projects in Awesome Lists tagged with alternative-polyadenylation
A curated list of projects in awesome lists tagged with alternative-polyadenylation .
https://github.com/vccri/sierra
Discover differential transcript usage from polyA-captured single cell RNA-seq data
alternative-polyadenylation alternative-splicing isoforms scrna-seq sierra
Last synced: 08 Dec 2024
https://github.com/bcgsc/tasrkleat-tcga-analysis-scripts
This repo stores codes for the analysis of tasrkleat results on TCGA RNA-Seq dataa
alternative-polyadenylation cleavage-sites rna-seq tcga tcga-data
Last synced: 03 Jan 2025
https://github.com/zyxue/kleat
Cleavage site prediction via de novo assembly
alternative-polyadenylation cleavage-sites de-novo-assembly rna-seq transcriptome-assembly
Last synced: 20 Dec 2024
https://github.com/federicomarini/trend-db
Home to the development of the TREND-DB application
alternative-polyadenylation alternative-splicing data-exploration database enrichment-analysis rnai-screening trendseq
Last synced: 06 Jan 2025
https://github.com/imamachi-n/passcan
Determine polyA sites from 3'end sequence data
3-end alternative-polyadenylation ngs rna-seq
Last synced: 19 Nov 2024
https://github.com/bcgsc/tasrkleat
Targeted analysis of alternative polyadenylation of candidate genes with RNA-Seq data
alternative-polyadenylation cleavage-sites cloud-computing de-novo-assembly docker google-cloud-platform rna-seq
Last synced: 03 Jan 2025