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Projects in Awesome Lists tagged with isoforms

A curated list of projects in awesome lists tagged with isoforms .

https://github.com/mskcc/vcf2maf

Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms

isoforms maf perl vcf vep

Last synced: 15 May 2025

https://github.com/vccri/sierra

Discover differential transcript usage from polyA-captured single cell RNA-seq data

alternative-polyadenylation alternative-splicing isoforms scrna-seq sierra

Last synced: 10 Apr 2025

https://github.com/zhengxinchang/isopedia

Simultaneous exploration of thousands of long-read transcriptomes by read-level indexing

alternative-splice fusion-gene isoforms long-read-sequencing transcriptome

Last synced: 23 Apr 2026

https://github.com/bcgsc/rna-scoop

:shipit: interactive visualization of single-cell transcriptomes

data-visualisation isoform isoforms scrna-seq single-cell-rna-seq

Last synced: 07 May 2025

https://github.com/mmkim1210/isoform-genetics

👨🏻‍👩🏻‍👧🏻‍👦🏻Heritability + genetic correlation analyses for 🧠human brain isoform expression

autism bipolar gwas isoforms rna-seq schizophrenia

Last synced: 14 Feb 2026

https://github.com/g-insana/ortho2tree

Pipeline for the selection of canonical proteins for reference proteomes

canonical isoforms msa proteomes refseq uniprot

Last synced: 09 Mar 2026

https://github.com/ylab-hi/atroplex

pan-transcriptome splicing isoform analysis

index isoforms pan-transcriptome transcript

Last synced: 26 May 2026

https://github.com/domenico-somma/papillon

A python module to read and plot Galaxy RNA-seq data

cuffdiff cufflinks cummerbund galaxy-project genes heatmap isoforms plot rna-seq transcript

Last synced: 21 Oct 2025