Projects in Awesome Lists tagged with bbmap

A curated list of projects in awesome lists tagged with bbmap .

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https://github.com/juke34/aline

Nextflow Alignment Pipeline - from fastq.gz to sorted bam/cram with ease

bbmap bowtie bowtie2 bwa bwamem2 dragmap graphmap2 hisat2 kallisto last minimap2 nextflow ngmlr novoalign nucmer salmon star starlong sublong subread

Last synced: 18 Feb 2026

https://github.com/erikrikarddaniel/magmap

Nextflow (nf-core) workflow for mapping reads to large collections of genomes.

bbmap metagenomics metatranscriptomics nextflow nf-core

Last synced: 20 Jan 2026