Projects in Awesome Lists tagged with differential-gene-expression
A curated list of projects in awesome lists tagged with differential-gene-expression .
https://github.com/nbisweden/workshop-rnaseq
Workshop • Analysis of RNA-seq data
bioinformatics differential-gene-expression mapping ngs rna-seq
Last synced: 05 Mar 2025
https://github.com/wdecoster/dea.r
Script to automate differential expression analysis using DESeq2, edgeR or limma-voom
differential-gene-expression r
Last synced: 09 Apr 2025
https://github.com/slowkow/fibrotime
:tangerine: View the gene expression response to TNF and IL-17A with vanilla Javascript and HTML.
bioinformatics bioinformatics-visualization differential-gene-expression javascript plotlyjs rna-seq tabulator vega-lite visualization
Last synced: 14 Apr 2025
https://github.com/tcp-lab/biotea
bioTEA - A user friendly tool to perform transcript expression analysis
bioinformatics-tool command-line-tool differential-gene-expression docker linux microarray python transcriptomics
Last synced: 08 Feb 2025
https://github.com/arkanivasarkar/rnaseq-data-analysis-pipeline
Pipeline for analyzing RNAseq data of human and mouse - beginner friendly with minimal user inputs
bioinformatics differential-gene-expression rna-seq rna-seq-pipeline
Last synced: 27 Mar 2025
https://github.com/meeranhussain/rnaseq_deseq2_snakemake
Differential gene expression analysis for samples with replicates using STAR-DeSeq2 pipeline
deseq2-analysis differential-gene-expression rna rna-seq-analysis rna-seq-pipeline snakemake-workflow star-aligner
Last synced: 25 Feb 2025
https://github.com/meeranhussain/rnaseq_degseq_snakemake_no-replicates
Workflow for differential gene expression analysis for non-replicate samples using DEGseq
differential-gene-expression rna-seq-analysis rna-seq-pipeline snakemake-workflow star-aligner
Last synced: 25 Feb 2025
https://github.com/12danielll/neurogenomics_project
This project focuses on analyzing sequencing data to understand molecular mechanisms of neurological diseases and predict the effectiveness of immunotherapy in breast cancer patients. It integrates Python and R scripts for data processing, statistical analysis, and visualization, alongside a comprehensive report detailing methods and findings.
bioinformatics biostatistics clustering clustering-algorithms data-analysis data-visualization deseq2 differential-gene-expression functional-analysis immune-therapy machine-learning neurological-disease neuroscience pca-analysis python r seurat single-cell-analysis
Last synced: 04 Mar 2025
