Projects in Awesome Lists tagged with rnaseq-pipeline
A curated list of projects in awesome lists tagged with rnaseq-pipeline .
https://github.com/Novartis/pisces
PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.
bioinformatics bioinformatics-pipeline rnaseq rnaseq-pipeline salmon transcriptomics
Last synced: 18 Jan 2025
https://github.com/czheluo/lncrna-pipeline
lncRNA analysis pipeline
lncrna-pipeline rnaseq-pipeline
Last synced: 13 May 2025
https://github.com/lieberinstitute/speaqeasyworkshop2020
EuroBioc2020 SPEAQeasy workshop https://eurobioc2020.bioconductor.org by Nick Eagles and Josh Stolz. For more information about SPEAQeasy check http://research.libd.org/SPEAQeasy/. For an example on how to use this RNA-seq processing pipeline and analyze the output files check http://research.libd.org/SPEAQeasy-example/.
bioconductor limma nextflow nextflow-pipelines rnaseq-pipeline rstats speaqeasy
Last synced: 28 Jan 2025
https://github.com/czheluo/circrna
Predict circRNA pipeline
circrna circrna-pipeline rnaseq-pipeline
Last synced: 13 Mar 2025