Projects in Awesome Lists by BiocPy
A curated list of projects in awesome lists by BiocPy .
https://github.com/biocpy/genomicranges
Container class to represent genomic locations and support genomic analysis
Last synced: 19 Dec 2024
https://github.com/biocpy/singlecellexperiment
Container class for single-cell experiments
Last synced: 23 Apr 2025
https://github.com/biocpy/multiassayexperiment
Container class to represent and manage multi-omics genomic experiments
Last synced: 23 Apr 2025
https://github.com/biocpy/scranpy
Single-cell data analysis, from C++ to Python
Last synced: 29 Nov 2024
https://github.com/biocpy/summarizedexperiment
Container class for genomic experiments
Last synced: 23 Apr 2025
https://github.com/biocpy/spatialexperiment
Container for Spatial Experiments
Last synced: 11 Apr 2025
https://github.com/biocpy/cellarr
Store collections of experimental data based on TileDB
Last synced: 29 Nov 2024
https://github.com/biocpy/tutorial
tutorial for all bioconductor representations in Python
Last synced: 22 Mar 2025
https://github.com/biocpy/scrnaseq
Collection of public single-cell RNA-seq datasets
Last synced: 23 Apr 2025
https://github.com/biocpy/pybiocfilecache
Python implementation of the BiocFileCache R package
Last synced: 17 Mar 2025
https://github.com/biocpy/environments
Conda configurations for managing BiocPy releases
Last synced: 19 Feb 2025
https://github.com/biocpy/cpptypes
Automatically generate wrappers for ctypes with C++
Last synced: 28 Jan 2025
https://github.com/biocpy/assorthead
Assorted C++ headers, vendored into a Python package.
Last synced: 28 Jan 2025
https://github.com/biocpy/tiledbarray
TileDB backed delayed arrays for Python
Last synced: 23 Apr 2025
https://github.com/biocpy/celldex
Collection of reference cell type datasets
Last synced: 29 Nov 2024
https://github.com/biocpy/biocutils
Miscellaneous utilities for BiocPy, mostly to mimic base functionality in R.
Last synced: 22 Mar 2025