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Projects in Awesome Lists tagged with drug-design

A curated list of projects in awesome lists tagged with drug-design .

https://github.com/AngelRuizMoreno/Jupyter_Dock

Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.

autodock autodock-vina cheminformatics computational-biology drug-design drug-discovery drug-repurposing jupyter-notebook ledock mdanalysis molecular-docking openbabel protein protein-structure py3dmol rdkit

Last synced: 09 Aug 2024

https://github.com/MolecularAI/REINVENT4

AI molecular design tool for de novo design, scaffold hopping, R-group replacement, linker design and molecule optimization.

ai astrazeneca cheminformatics chemistry deep-learning denovo-design drug-design drug-discovery generative-ai ml molecule-generation neural-networks reinforcement-learning transfer-learning

Last synced: 03 Aug 2024

https://github.com/sandbox-quantum/Tangelo

A python package for exploring end-to-end chemistry workflows on quantum computers and simulators.

chemistry drug-design drug-discovery ft nisq quantum quantum-algorithms quantum-chemistry quantum-computing

Last synced: 03 Aug 2024

https://github.com/lucidrains/neural-plexer-pytorch

Implementation of Nvidia's NeuralPlexer, for end-to-end differentiable design of functional small-molecules and ligand-binding proteins, in Pytorch

artificial-intelligence deep-learning denoising-diffusion drug-design protein-ligand-interactions

Last synced: 03 Oct 2024

https://github.com/lucidrains/decomp-opt-pytorch

Implementation of DecompOpt - Controllable and Decomposed Diffusion Models for Structure-based Molecular Optimization - ICLR 2024

artificial-intelligence deep-learning denoising-diffusion drug-design se3-equivariance

Last synced: 03 Oct 2024

https://github.com/futianfan/CORE

CORE: Automatic Molecule Optimization using Copy & Refine Strategy (AAAI 2020)

drug-design drug-discovery molecule molecule-generation

Last synced: 08 Aug 2024

https://github.com/rohanv01/molecule_format_converter

This jupyter notebook let's you convert sdf to pdb or SMILES to pdbqt file formats for a batch of compounds to perform cheminformatics and drug discovery projects

cheminformatics drug-design drug-discovery molecule problem-solving smiles

Last synced: 26 Sep 2024