An open API service indexing awesome lists of open source software.

"bioinformatics" Awesome Lists

Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

awesome awesome-list bioinformatics

3,410 stars
628 forks
181 projects

Last updated: 17 Apr 2025

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

analysis analysis-pipeline atac-seq awesome-list bioinformatics cell-clusters cell-cycle cell-differentiation cell-populations clustering

3,347 stars
1,010 forks
486 projects

Last updated: 10 Apr 2025

awesome-cheminformatics

A curated list of Cheminformatics libraries and software.

awesome awesome-list bioinformatics cheminformatics chemistry

743 stars
119 forks
108 projects

Last updated: 07 Apr 2025

awesome-bioie

🧫 A curated list of resources relevant to doing Biomedical Information Extraction (including BioNLP)

awesome awesome-list bioinformatics biomedical biomedical-data biomedical-language information-extraction medical-informatics natural-language-processing nlp

371 stars
33 forks
119 projects

Last updated: 08 Apr 2025

Awesome-Bioinformatics-Benchmarks

A curated and summarized list of bioinformatics bench-marking papers and resources.

benchmarking-study bioinformatics bioinformatics-benchmarks collection genomics

337 stars
59 forks
133 projects

Last updated: 07 Apr 2025

awesome-cancer-variant-resources

A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

awesome-list bioinformatics cancer cancer-genomics cancer-variants clinical-trials mutations u24ca289073

309 stars
72 forks
52 projects

Last updated: 26 Mar 2025

awesome-nanopore

A curated list of awesome nanopore analysis tools.

awesome-list bioinformatics machine-learning nanopore

263 stars
49 forks
73 projects

Last updated: 10 Apr 2025

awesome-vdj

📚 Tools and databases for analyzing HLA and VDJ genes.

antibody awesome-list b-cell-receptor bcr bioinformatics hla hla-database hla-typing immunology t-cell-receptor

219 stars
28 forks
30 projects

Last updated: 18 Mar 2025

awesome-small-molecule-ml

A curated list of resources for machine learning for small-molecule drug discovery

awesome awesome-list bioinformatics cheminformatics drug-discovery machine-learning

216 stars
28 forks
109 projects

Last updated: 27 Mar 2025

awesome-expression-browser

😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎

atlas awesome-list bioinformatics data-exploration data-visualization expression-browser gene-expression gene-expression-profiles humancellatlas rna-seq-data

133 stars
38 forks
161 projects

Last updated: 20 Feb 2025

awesome-genetics

A curated list of awesome personal genomics software, libraries, and educational resources.

23andme ancestry bioinformatics consumer-dna-test dna geneology genetics genomics health snpedia

124 stars
9 forks
36 projects

Last updated: 29 Oct 2024

awesome-structural-bioinformatics

Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.

alphafold awesome-list bioinformatics bioinformatics-analysis bioinformatics-pipeline biology cheminformatics chemistry deep-learning docking

70 stars
10 forks
173 projects

Last updated: 06 Mar 2025

top-pharma50

Top open source software from the top 50 pharmaceutical companies

ai awesome awesome-list awesome-lists bioinformatics biology-ai computational-biology computational-chemistry ebiology life-sciences

59 stars
3 forks
201 projects

Last updated: 24 Mar 2025

awesome-ai

Awesome list for all things AI, ML and deep learning

artificial-intelligence awesome-list bioinformatics deep-learning machine-learning natural-language-processing network-analysis statistical-learning

56 stars
7 forks
59 projects

Last updated: 27 Mar 2025

awesome-bioinformatics-formats

Curated list of bioinformatics formats and publications

awesome-list bioinformatics bioinformatics-data formats

53 stars
4 forks
49 projects

Last updated: 12 Oct 2024

Awesome-Computational-Structural-Biology

A curated list of awesome self-learning materials in Computational Structural Biology, such as sources, tutorials, etc.

alphafold2 awesome awesome-list bioinformatics computational-biology deep-learning deep-neural-networks

42 stars
0 forks
40 projects

Last updated: 03 Apr 2025

awesome-phages

A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.

bacteria bacteriophages bioinformatics phages

40 stars
5 forks
35 projects

Last updated: 26 Apr 2024

awesome-awesomeness-bioinformatics

A list of awesome awesomeness related to bioinformatics and associated fields

awesome-list bioinformatics

40 stars
3 forks
47 projects

Last updated: 09 Apr 2025

awesome-bio-go

A curated list of Bioinformatics software written in the Go language.

bioinformatics bioinformatics-pipeline go golang

21 stars
1 forks
32 projects

Last updated: 28 Mar 2025

awesome-data-steward-resources

A list of resources to learn about data stewardship

bioinformatics data-management data-stewardship fair-principles

14 stars
1 forks
37 projects

Last updated: 05 Apr 2025

Awesome-LatchBio

A curated list of awesome Bioinformatics pipelines and software available on LatchBio

awesome bioinformatics latchbio

12 stars
4 forks
35 projects

Last updated: 26 Dec 2023

awesome-molecular-modeling-and-drug-discovery

A curated list of awesome Molecular Modeling And Drug Discovery 🔥

alphafold alphafold2 bioinformatics drug-discovery molecular-docking molecular-evolution molecular-generation molecular-modeling protein-engineering protein-sequence

11 stars
0 forks
58 projects

Last updated: 07 Feb 2025

top-life-sciences

Top Life Sciences open-source software

ai awesome awesome-list awesome-lists bioinformatics biology biology-ai computational-biology computational-chemistry ebiology

10 stars
2 forks
201 projects

Last updated: 30 Mar 2025

top-pharma-fr

Top open source software from French pharmaceutical companies

ai awesome awesome-list awesome-lists bioinformatics biology-ai computational-biology computational-chemistry ebiology france

2 stars
0 forks
83 projects

Last updated: 20 Dec 2024

awesome-bioinfo-tools

A curated list of awesome Bioinformatics tools.

awesome-list bioinformatics bioinformatics-analysis bioinformatics-tool

1 stars
1 forks
129 projects

Last updated: 23 Aug 2023

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representation-learning 17 language 17 cheatsheet 17 code 17 containers 17 stable-diffusion 16 data-structures 16 webgl 16 microservices 16 mlops 16 aigc 16 resource 16 articles 16 optimization 16 analytics 16 learning-resources 16 image-processing 16 bert 16 foundation-models 16 networking 16 ros 15 cloud-native 15 graphics 15 detection 15 autonomous-vehicles 15 software-development 15 distributed-systems 15 reverse-engineering 15 transformers 15 nerf 15 pentest 15 technology 15 big-data 15 monitoring 15 devsecops 15 mac 14 data-engineering 14 vuejs 14 backend 14 speech-recognition 14 icons 14 dart 14 seo 14 android-development 14 terminal 14 animation 14 android-library 14 recommender-system 14 telegram 14 multimodal-deep-learning 14 performance 14 mysql 14 selfhosted 14 readme 14 prompt 14 react-components 14 webassembly 14 node 14 dotnet-core 13 foss 13 finance 13 open-data 13 evm 13 generative-adversarial-network 13 guide 13 dapp 13 command-line 13 podcast 13 unicorns 13 mcp 13 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quantum-computing 11 front-end-development 11 npm 11 ctf 11 creative-coding 11 network 11 programming-languages 11 agents 10 model-compression 10 flutter-apps 10 android-app 10 management 10 explainable-ai 10 haskell 10 authentication 10 infrastructure-as-code 10 cuda 10 vr 10 deepseek 10 android-application 10 climate-change 10 hosting 10 yolo 10 gpts 10 interview-questions 10 bot 10 writing 10 indonesia 10 datascience 10 operating-system 10 unsupervised-learning 10 hacktoberfest2021 10 machine-learning-algorithms 10 interpretability 10 privacy-tools 10 blockchain-technology 10 gpu 10 cv 10 threat-intelligence 10 text-mining 10 semantic-web 10 developer 10 webdevelopment 10 movies 10 rest-api 10 medical-imaging 10 golang-library 10 reading-list 10 rag 10 time-series-analysis 10 diffusion 10 image-generation 10 guides 10 arduino 10 docs 10 edge-computing 10 benchmark 10 geospatial 10 code-generation 10 malware 10 students 10 hacking-tools 10 chatgpt-api 10 few-shot-learning 9 quantization 9 ux 9 sre 9 book 9 article 9 conference 9 anime 9 classification 9 erlang 9 knowledge-base 9 shell 9 leadership 9 unix 9 simulation 9 jupyter-notebook 9 ide 9 exploit 9 solana 9 swift-library 9 flutter-examples 9 flask 9 chrome 9 material-design 9 static-site-generator 9 augmented-reality 9 semantic-segmentation 9 trading 9 news 9 in-context-learning 9 podcasts 9 applications 9 social-network 9 data-analytics 9 video-generation 9 fairness 9 chain-of-thought 9 webcomponents 9 math 9 microservices-architecture 9 neuroscience 9 cicd 9 reddit 9 bug-bounty 9 mobile-development 9 google 9 reference 9 arkit 9 sentiment-analysis 9 distributed-database 9 system-design 9 email 9 fpga 9 websites 9 ionic 9 electronics 9 3d-reconstruction 9 ros2 9 cyber-security 9 awesome-ai 8 multimodal-large-language-models 8 conferences 8 interview-preparation 8 bigdata 8 compiler 8 vision-transformer 8