Projects in Awesome Lists tagged with pangenome-graph
A curated list of projects in awesome lists tagged with pangenome-graph .
https://github.com/dubssieg/pancat
Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions
pangenome pangenome-graph pangenomics variation-graph variation-graphs
Last synced: 10 May 2025
https://github.com/qwx9/strangepg
strange pangenome and large graph visualization
coarsening external-memory gfa-format graph-visualization indexing large-graph pangenome pangenome-graph scalability visualization
Last synced: 11 Feb 2025
https://github.com/dubssieg/gfagraphs
Library to parse, edit and handle in memory GFA graphs
pangenome pangenome-graph pangenomics variation-graph variation-graphs
Last synced: 10 May 2025
https://github.com/dubssieg/rs-pancat-compare
Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.
distance distance-calculation distance-measures graph-distance pangenome pangenome-graph pangenomics variation-graph variation-graphs
Last synced: 26 Nov 2024
https://github.com/sciencegenome/pangenome-graph-combiner
rust pangenome graph asm
bioinformatics bioinformatics-pangenome-graphs genome-analysis-annotation graphs-algorithms pangenome pangenome-graph
Last synced: 18 Mar 2025
https://github.com/sciencegenome/pangenome-graph-analyze
rust pangenome graph analyze
bioinformatics genome-analysis genome-analysis-annotation pangenome-alignment pangenome-analysis pangenome-graph pangenome-graphs
Last synced: 18 Mar 2025
https://github.com/sciencegenome/bedtools-pangenome-intersect
rust pangenome bedtools intersect
bedtools bedtoolsintersect bioinformatics bioinformatics-data genome-analysis genome-sequencing pangenome pangenome-graph
Last synced: 18 Mar 2025
https://github.com/gauravcodepro/panache-extract
maf to panache and extracting all snps and pangenome specific information.
pangenome pangenome-extraction pangenome-graph
Last synced: 22 Feb 2025
https://github.com/gauravcodepro/streamlit-pangraphs-pangenome
a pangraph visualization and pangenome visualization component for the pangenome.
bioinformatics pangenome pangenome-graph streamlit streamlit-application streamlit-webapp
Last synced: 22 Feb 2025
https://github.com/sciencegenome/pangenome-graph-bed
rust pangenome graph bed
bioinformatics genome-analysis genome-analysis-annotation pangenome pangenome-graph pangenome-inference
Last synced: 18 Mar 2025