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Projects in Awesome Lists tagged with nanopore-sequencing
A curated list of projects in awesome lists tagged with nanopore-sequencing .
https://github.com/bcgsc/NanoSim
Nanopore sequence read simulator
genome nanopore-sequencing oxford-nanopore simulator transcriptome
Last synced: 02 Aug 2024
https://github.com/GoekeLab/xpore
Identification of differential RNA modifications from nanopore direct RNA sequencing
genomics machine-learning modification nanopore nanopore-sequencing python rna rna-modifications rna-seq transcriptomics
Last synced: 02 Aug 2024
https://github.com/GoekeLab/bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data
bambu bioconductor long-reads nanopore nanopore-sequencing r rna-seq rna-seq-analysis transcript-quantification transcript-reconstruction transcriptomics
Last synced: 02 Aug 2024
https://github.com/bioinfomaticsCSU/deepsignal
Detecting methylation using signal-level features from Nanopore sequencing reads
bioinformatics epigenetics methylation nanopore-sequencing tensorflow
Last synced: 02 Aug 2024
https://github.com/bcgsc/arcs
🌈Scaffold genome sequence assemblies using linked or long read sequencing data
10xgenomics assembler bioinformatics c-plus-plus genome graph nanopore-sequencing oxford-nanopore pacbio-data scaffold science
Last synced: 29 Sep 2024
https://github.com/bcgsc/RNA-Bloom
:hibiscus: reference-free transcriptome assembly for short and long reads
bioinformatics-tool bulk-rna-seq denovo-assembly nanopore-sequencing pacbio-sequencing rna-seq single-cell-rna-seq
Last synced: 02 Aug 2024