Projects in Awesome Lists tagged with spatial-proteomics
A curated list of projects in awesome lists tagged with spatial-proteomics .
https://github.com/camlab-bioml/rakaia
Scale interactive spatial omics in the browser to thousands of images | https://rakaia.io/
browser histology imaging-mass-cytometry multiplexed-imaging omics spatial-analysis spatial-biology spatial-data spatial-proteomics spatial-transcriptomics viewer visium xenium zarr
Last synced: 08 Mar 2026
https://github.com/nadeemlab/smprofiler
Spatial Multiomics Profiler for Spatial Characterization of Tissue Microenvironment (https://smprofiler.io)
biomarker-discovery clinical-workflow deeplearning-ai histology-images image-analysis multiplexed-imaging python single-cell-analysis spatial-analysis spatial-data spatial-proteomics spatial-transcriptomics tumor-microenvironment
Last synced: 16 Sep 2025
https://github.com/complextissue/spatiomic
A Python package for unsupervised analysis of spatial (prote)omics data.
image-analysis multiplexed-imaging pathology pathoplex scverse spatial-proteomics spatial-statistics
Last synced: 05 Mar 2026
https://github.com/lgatto/proloc
A unifying bioinformatics framework for organelle proteomics
bioconductor proteomics proteomics-data r spatial-proteomics visualisation
Last synced: 06 Apr 2025
https://github.com/czbiohub-sf/grassp
GRaph-based Analysis of Subcellular/Spatial Proteomics
anndata proteomics-data-analysis scanpy spatial-proteomics subcellular-localization
Last synced: 10 Feb 2026
https://github.com/lgatto/qsep-manuscript
Assessing sub-cellular resolution in spatial proteomics experiments
proloc prolocdata proteomics spatial-proteomics
Last synced: 14 Mar 2025
https://github.com/mohamedomar2020/pca_tme
Distinct mesenchymal cell states mediate prostate cancer progression
prostate-cancer single-cell-rna-seq spatial-proteomics stromal-cells tumor-microenvironment
Last synced: 18 Sep 2025
https://github.com/uclouvain-cbio/lstat2340
Traitement statistique de données omiques
bioconductor mass-spectrometry msnbase proloc proteomics spatial-proteomics tutorial
Last synced: 24 Feb 2026
